Gene Information

Name : Pse7367_2907 (Pse7367_2907)
Accession : YP_007103588.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3662404 - 3663315 bp
Length : 912 bp
Strand : -
Note : PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: ter:Tery_3358 hypothetical protein; PFAM: ABC-3; SPTR: ABC-3

DNA sequence : 
ATGTTATTGCCCAGTATATTATTCAGTAAATTAATCGAACCGTTCAGCGCCCCTTTTATGCAGCGATCGCTCAGTGTGGG
CGTGATGGTAGGGCTAATTTGTGCCGTAGTTGGTACTTACCTGATGGTGCAACGCTTGGCTTTGCTGGGGGATGCGATCT
CCCATTCGGTGCTACCAGGCATGGCGATCGCCTATGCCCTCGAGGCCAGTATTGTAATTGGCGCATTCATTGCCGGCATC
CTCAGCACGATCGTGATCAACTGGATCAGGGCGCGATCGGACATCAAAGAAGACGCGGCGATGGGGATTGTATTCTCAGC
CTTTTTTGCCCTGGGGATTATTTTGATCACTATAATCCAGAAAAACGAGCCGATCGATCTCAATCATTTTCTATTTGGCA
ATATCCTGGCGGTGACCTTTAATGACCTGCGCGATACGGCAATCATTGCGGTGGCGGTGATCGCGGTGATTATTTTGCTC
TACAAGGAATTATTGTTTTATTCCTTTGACCCATTGGGGGCGCAGGCCAATGGCTTACCGATCAATTTACTTAACCTGGG
TCTGATGGTATTGATCGCCCTGACGATCGTGGCCAGCCTCAAGATTGTGGGTGTAGTGCTGGTGTTAGCCTTGCTAATTG
CCCCTGGAGCCACGGCCTATTTGCTGGTGCCACGCTTTCATCAGGTGATGCTTCTGGCGGCTGGATTTGGGGTGATCGCC
AGTCTCAGTGGTATTTATGTGAGCTATTTCACGAATATTCCCTCTGGCCCGGCGATCGTGCTGTTTGCCTTTGGCTTGTT
TATCTTGGCGCTACTGTTCAGCCCCAGCCAGGGTGTACTAACTAATCCGCATACCGATAGTGGTTCATCGCCTTTGTGGC
AGGAAATTAAAAGCCTTTTGCCCAGAAGGTAG

Protein sequence : 
MLLPSILFSKLIEPFSAPFMQRSLSVGVMVGLICAVVGTYLMVQRLALLGDAISHSVLPGMAIAYALEASIVIGAFIAGI
LSTIVINWIRARSDIKEDAAMGIVFSAFFALGIILITIIQKNEPIDLNHFLFGNILAVTFNDLRDTAIIAVAVIAVIILL
YKELLFYSFDPLGAQANGLPINLLNLGLMVLIALTIVASLKIVGVVLVLALLIAPGATAYLLVPRFHQVMLLAAGFGVIA
SLSGIYVSYFTNIPSGPAIVLFAFGLFILALLFSPSQGVLTNPHTDSGSSPLWQEIKSLLPRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-33 44
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-33 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-33 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-33 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-33 44
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-28 43
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 6e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_2907 YP_007103588.1 ABC transporter BAC0352 Protein 1e-33 44
Pse7367_2907 YP_007103588.1 ABC transporter BAC0442 Protein 2e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_2907 YP_007103588.1 ABC transporter VFG0528 Protein 1e-33 44