Gene Information

Name : Pse7367_0274 (Pse7367_0274)
Accession : YP_007101017.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 351294 - 353921 bp
Length : 2628 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCAACCAACCCCCAACAATTTACCGAAAAAGCCTGGGCAGCGATCGTACGCACCCCCGATATTGTCAAAGCGGC
TCAGCAACAGCGAATCGAGAGCGAACATTTATTTAAATCCCTCCTTGACGAAGAAGGATTAGCCGCTAGTATTTTTACGA
AGGCAGGCATCAGTGTGCAAATGTTGCGCGATCGTGCTGAAGCCTTTATTAATAGTCAGGCCAAAATTTCTGGTAGCAAC
TCTTCGGTTTACTTAGGTGATAGCTTAGATAAATTATTCGATCGGGCCGAAAATGAACGTAAAGCCTTTGGTGATGACTT
TATTTCGATCGAACATATGATATTGCCCTATGGCGAAGACGATCGCTTTGGCAAAAGACTATTTAAGGAAGTAGGCTTAA
CGGAAGCCAAGTTAAGAGAAATTATTGAGCAAATTCGTGGCAATCAGAAGGTGAACGATCAAAATCCTGAGAATAAATAC
GAGTCGTTAGAAAAATATGGCCGTGACCTGACCGAATTGGCACGGGAAGGTAGGCTTGATCCAGTTATTGGCCGCGATGA
TGAGATTCGCCGCACAATTCAGATTTTGTCCCGCCGCACCAAAAATAATCCGGTTTTGATCGGGGAACCTGGCGTAGGTA
AAACCGCGATCGCCGAAGGTTTGGCACAGCGGATCATTCGTGGTGATGTGCCAGAATCACTGCGCGATCGCAAATTAATT
GGCCTGGACATGGGTGCGCTGATCGCTGGCGCTAAATATCGCGGTGAGTTTGAAGAACGCCTCAAAGCGGTGCTAAAGGA
AGTGACTAGCTCCAATGGCAATATTGTGTTGTTTATTGATGAAATTCATACGGTAGTTGGTGCTGGCGCAACCCAGGGCA
CAATGGATGCGGGAAACTTGCTCAAGCCAATGCTGGCCAGGGGTGAACTGCGTTGTATTGGTGCAACTACGCTGGATGAA
TATCGCAAATATATTGAGAAAGATGCCGCATTGGAACGTCGTTTCCAACAGGTTTATGTTGATCAACCGAATATTGAAAA
CACGATCTCAATTTTGCGCGGTCTGAAAGAGCGTTATGAAGTTCATCATGGGGTCAAGATTGCTGATAATGCTCTGATCG
CAGCGGCGGCTTTGTCTAACCGTTATATCAGCGATCGCTTTTTACCGGATAAGGCAATTGACTTGGTGGATGAAGCAGCG
GCCAAGTTAAAAATGGAAATCACTTCCAAACCGGAAGAACTGGACGAAATCGATCGCAAGATTTTGCAACTGGAGATGGA
GAAACTCTCCCTCAAGCAAGATAATGACCCCGATGCAGTGGAGCAACGCGATCGGCTCAATCGAGAATTGGCCAATTTGA
AGGGTGAGCAATCGACCCTGACGGCACAATGGCAAGCCGAGAAAGAAGTGATTGACCAGATTCGCCAACTCAAAGAAGAA
AGCGATCGCGTCAATGTGGAAATCGAACAGGCCGAACGCAACTATGACCTTAATCGTGCCGCTGAACTGAAATATGGCAA
GCTTACGGATTTGCATCGCCAACTGGAAACCGCTGAGGCCAAATTAGCGGAAGCACAAACCAGTGGCCTGAGTCTGTTGC
GCGAAGAGGTAACTGAAGAAGACATCGCCGAAATTATTTCCAAATGGACAGGGATTCCGGTTAGCAAACTGGTAGAGACA
GAAAAAGAAAAGCTACTGTTCCTGGAAGATGAACTGCATCAGCGGGTGATTGGTCAATCGGAAGCTGTGACCGCTGTATC
CGATTCAATTCAACGATCGCGGGCAGGTCTGGCCGATCCCAACCGACCGATCGCCAGCTTTATCTTCATGGGGCCGACCG
GTGTAGGTAAAACAGAACTGGCTAAAGCATTGGCAGCCTATCTATTCGACGCTGAAGATGCGATGGTGCGGATTGATATG
TCGGAATATATGGAAAAGCACAGCGTCTCGCGCCTGGTTGGTGCGCCTCCCGGCTATGTTGGCTACGAAGAAGGCGGTCA
ACTAACTGAAATCGTGCGTCGTCGTCCCTATGCGGTGATTTTGTTTGATGAAATTGAGAAAGCTCATCCGGATGTGTTTA
ATATCATGTTGCAAATCCTGGATGATGGTCGGGTGACCGACTCCCAGGGACGCACAGTGGACTTCAAAAACACTGTGATT
ATCATGACCAGTAACATTGGTTCACAGTTTATTCTGGATGTGGTCGGCGACGACAGTCGCTATGAGGAAATGCGCGATCG
AGTAATCAATGCCCTGCGCGCTAATTTCCGCCCAGAGTTCCTCAATCGGGTCGATGAGATCATCATCTTCCATGCCCTGG
TGAAGGCAGAGCTGCGGGAGATCGTGAAGCTGCAAATCAAGCGATTAGAAAAGCGGTTGGTCGATCGTAAGATGGGGCTA
AAGCTCTCGGAGGCTGCGCTGGACTTCATTGCAGAGGTAGGTTATGACCCGGTCTATGGGGCAAGGCCGCTGAAGCGTAT
CATTCAAAGGCAGATCGAAACCCAGATCGCTAAATCTCTATTGCGCGGTGAGTTTGGCGAGGGCGATACAATTTTTGTGG
ATATTGAAAATGAACGCCCCACCTTTAAAAAGCTCACCCCTGATTTTGTTGAGGCTGTAACTACTTAG

Protein sequence :
MQPTNPQQFTEKAWAAIVRTPDIVKAAQQQRIESEHLFKSLLDEEGLAASIFTKAGISVQMLRDRAEAFINSQAKISGSN
SSVYLGDSLDKLFDRAENERKAFGDDFISIEHMILPYGEDDRFGKRLFKEVGLTEAKLREIIEQIRGNQKVNDQNPENKY
ESLEKYGRDLTELAREGRLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIRGDVPESLRDRKLI
GLDMGALIAGAKYRGEFEERLKAVLKEVTSSNGNIVLFIDEIHTVVGAGATQGTMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPNIENTISILRGLKERYEVHHGVKIADNALIAAAALSNRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPEELDEIDRKILQLEMEKLSLKQDNDPDAVEQRDRLNRELANLKGEQSTLTAQWQAEKEVIDQIRQLKEE
SDRVNVEIEQAERNYDLNRAAELKYGKLTDLHRQLETAEAKLAEAQTSGLSLLREEVTEEDIAEIISKWTGIPVSKLVET
EKEKLLFLEDELHQRVIGQSEAVTAVSDSIQRSRAGLADPNRPIASFIFMGPTGVGKTELAKALAAYLFDAEDAMVRIDM
SEYMEKHSVSRLVGAPPGYVGYEEGGQLTEIVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNTVI
IMTSNIGSQFILDVVGDDSRYEEMRDRVINALRANFRPEFLNRVDEIIIFHALVKAELREIVKLQIKRLEKRLVDRKMGL
KLSEAALDFIAEVGYDPVYGARPLKRIIQRQIETQIAKSLLRGEFGEGDTIFVDIENERPTFKKLTPDFVEAVTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-99 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-99 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_0274 YP_007101017.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-105 42
Pse7367_0274 YP_007101017.1 ATP-dependent chaperone ClpB VFG2076 Protein 9e-114 42