Gene Information

Name : Pse7367_2011 (Pse7367_2011)
Accession : YP_007102712.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2531921 - 2533609 bp
Length : 1689 bp
Strand : -
Note : PFAM: Integrase core domain; InterPro IPR001584; KEGG: amr:AM1_E0077 transposase, putative; PFAM: Integrase, catalytic core; SPTR: Transposase, putative

DNA sequence :
GTGTCAGGTCAATATATAAAACAATATCAAGTGCAAGTGTACAAGAAAGCACGAGAGGTCGGCTGCAATCAAAATGAGTC
AGCCGAGATTGCCGGCATATCAGTCCGTAGCGGCAGCCGTATTGAGCAAGGCAAACACCAGCCCAAGAGTAAAGGTGAGC
GAGATTGGCGCACCCGCCGAGATCCGCTATCAGGAGTGTGGGAGGAAGAGCTAGAGCCAATGCTTCGACGTGAGCCTCGT
CTAGAGGCGATGACATTGTATGAATATCTAGCCGAGCATTATCCAGGCCAATATGAGCAACAATTGCGTACCTTACAAAG
GCGAGTGCAGGTATGGAAAAGTATCCATGGCAAACCGCAGGAGGTAATGTTTGAGATCCGCCATCAGCCCGGCGAAATGG
GTCTATCAGATTTTACCGAGCTCAAACAGGTGGAAGTTACCATCAAAGGGAAACAATATGAGCACCTGCTGTACCACTAC
CGTCTGGCCTACAGTGGCTGGCAATATGTGCAGGTAATCGAGGGTGGCGAGAGCTTTATCGGCTTGTCTGAAGGATTACA
GAATGCGCTGCATGCCTGTGGTGGTGTACCAAAGCAGCATCGCACCGATAATTTGAGTGCTGCCTATCGGAATATGGCGG
GCAAACGGCATAAACCACTAACCCAATTCTATGCCGAGCTATGTGAACACTATGGCATGAGTCCAAGTCGCAATAACCCA
GGCGTGGCTCATGAAAATGGCTCCATCGAATCTCCCCATGGACATTTCAAGCGCCGGTTGCGCCAAGCTCTGTATTTGCG
TGGCAGCTTTGAGTTTGAGTCAGTGAGTGCATATCAAGAATTTATCGAGCAGGTGGTTGCCAAGCTCAATTGTAAATGCA
GCGCCAAGTTTGCCGAGGAAAAAGTAACCCTACAACCACTACCGAGATATCGCTGTGCCGATTACGAAGAATTGACGGTG
CGGGTGACCTGCCACAGCACCATTTCGGTGCGCTGCATTCTTTACACGGTGCCATCAAGACTGATTGGCAGGCAGCTGAA
TATTCATATCTATCACAACCGCCTGGTCGGTTATTTGGGGCAGCAACAAGTGGTGGAACTACCCCGTTTGCGAGTACATG
GGTCAGCCAAAATCCGCCGTGCTCGCTGTATTAACTACCGCCATGTAATTGATAGCCTCAGGCGTAAACCCCGTGCCTTT
ATTTACTGCACCTGGCAGCAAGACCTATTGCCTAATCAACAATGGCGGCAGCTGTGGCAGAGGTTACAGGCTGATTTTGA
AATCGATAATGCAGCGCGCATCATGGTTGAAGCCCTCTATATTGCTGCCAAGCACGATAGAGAAACTACAGTGGCCGACT
ATCTTGAAACCCAACTGCAGCAGGGCACTCTCAGCCTGAAGGCTCTACAGCAACAGTTCCTACTACCCCAGCAGCAATTG
AGCGTACCTCAACTAAACGTACAACAACATTCGCTTTCAGCCTATGACCAACTCCTCGAAACCAAACCCGAACAATACTC
TGAGCCTGATACTCAAACAGCTACGACTCTCGCACATGCTCCAACATTGGCAGACTATCGAGCAGAAGGCCACCCAACAG
CATTGGGCTTACGACCGGTTCTTGCTCGCTCTGTGCGAATTGGAACTGGATTATCGCCAACAGAATCGGATCAAACGAGC
TCTCGCTGA

Protein sequence :
MSGQYIKQYQVQVYKKAREVGCNQNESAEIAGISVRSGSRIEQGKHQPKSKGERDWRTRRDPLSGVWEEELEPMLRREPR
LEAMTLYEYLAEHYPGQYEQQLRTLQRRVQVWKSIHGKPQEVMFEIRHQPGEMGLSDFTELKQVEVTIKGKQYEHLLYHY
RLAYSGWQYVQVIEGGESFIGLSEGLQNALHACGGVPKQHRTDNLSAAYRNMAGKRHKPLTQFYAELCEHYGMSPSRNNP
GVAHENGSIESPHGHFKRRLRQALYLRGSFEFESVSAYQEFIEQVVAKLNCKCSAKFAEEKVTLQPLPRYRCADYEELTV
RVTCHSTISVRCILYTVPSRLIGRQLNIHIYHNRLVGYLGQQQVVELPRLRVHGSAKIRRARCINYRHVIDSLRRKPRAF
IYCTWQQDLLPNQQWRQLWQRLQADFEIDNAARIMVEALYIAAKHDRETTVADYLETQLQQGTLSLKALQQQFLLPQQQL
SVPQLNVQQHSLSAYDQLLETKPEQYSEPDTQTATTLAHAPTLADYRAEGHPTALGLRPVLARSVRIGTGLSPTESDQTS
SR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 2e-82 49
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 4e-83 49
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 4e-83 49
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-83 49
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-83 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_2011 YP_007102712.1 integrase catalytic subunit VFG1728 Protein 4e-83 49