Gene Information

Name : Chro_5648 (Chro_5648)
Accession : YP_007100392.1
Strain :
Genome accession: NC_019699
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 41816 - 43918 bp
Length : 2103 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase

DNA sequence :
ATGCAACGCCATCACGAGCAACACGGGCATCAGCAACCCCAGCAAGAATACATTGGACATGACGAACATCAGAGGCAGCT
TGCTGATGCCCGTCAGGATTTGCATGAAGCTCGACAGCAACATTCCCACCACGATCGGCACGCAGGTCATAGCCCAGAAA
TCTTTCAGCGACGATTCTTCATCTGCCTAGTGCTAAGTTTGCCCGTGCTGTACTACGCGCCCATGTTTCAGATGTGGTTC
GGGTATCGCGCGATCGCGTTTCCTGGTTCGGAGTGGGTTGCCCCGATTCTCAGCACAGTCATCTACTTTTATGGCGGTTG
GGTTTTTCTGCGAGGGGCATGGCGTGAATTTCACAGCAAGATTGGCATGATGACGCTGATTGCGCTCGCTATCACTGTTG
CCTTTATTTACAGTCTTGCTGTTTCATTTGGACTGAGAGGCGAACCATTTTATTGGGAATTGGTAACACTTGTTGACATC
ATGCTGCTAGGGCACTGGATCGAGATGGCATCGGTTCAGGGAGCAAGTCGAGCCTTAGAGAATTTAGCAGAACTCGTGCC
TAGCGTGGCACATCGTTTGGTCAATGGACGAGTTGAGGATGTTCAGGTCGATACGCTACAACACAATGACTTAATTCTAG
TTCGTCCTGGCGAACAAATTCCGATCGATGGCGAAGTCACAGAAGGTGCTTCGAGTGTAAATGAAGCTTTTCTCACAGGC
GAATCCCGCCCAGTTACCAAGCAAGTCAACGATGAAGTGGTTGCCGGAGCCGTAAATGGAGATGGCGCGTTGACCGTGAA
AGTCACTCGAACAGGCGAACAAACTACTCTTAGTCAGATCGTGCGCCTGGTTGAGGAAGCGCAAAGCTCTAAAAGCCGCT
ATCAAGCATTAGCGGATCGATTAGCGTATTGGTTGACGCTAATCGCGATTGCAGTTGCAACGCTGACCTTTATTGTTTGG
CTGGCATTTGGTCCCGATAGTACTTTTGCGATTAATCGCGCTGTAACAGTATTAGTGATTGCTTGTCCGCACGCATTAGG
CTTAGCGATTCCCCTCGTGATTGTCAATGCAACAGCGATGTCGGCGAAACATGGAATTTTGGTTCGCAGTCGAGAAGCGT
TTGAGCGAGCAAGAAACATTCAAACAATTGCATTCGATAAAACTGGAACATTAACGGAAGGACAATTTGGGGTTCAACGA
ATTTATACTGATAAAATTGATGAACTCAAAGCGTTAGGAATCGCGGCAACGCTAGAATCGCTCTCCGAACATCCTCTGGC
TCAAGCGATCGTGCAGGAAGCAGATCGTCGCCAGATTCAATTTACAAAAGGCGAAGATTTTCAAGCAATTCCTGGTAGCG
GTGTGGAAGGCACGGTAAACAACCAACGTTATCGAGTCGGTAGACCTGAATGGGTGCGCGATTTGAAGCTAGCATTCCCA
GCAGCCTTACAAGCGGGATTAGAGCAAAGTGAGTCGCGGGGAGAAAGCGCGATCGTCCTCATGGACGAGCAGCAAGTGCT
AGCTGTTTTTGGATTAGCCGATCGAGTGCGGGAACCTGCAAGAGAAGCTGTCGCGAGATTGCAGGAAATGGGTGTGCAGG
TGGTGATGATTACGGGCGATGCAGAAGCGGTTGCCAAGACCGTTGCGGAGGATTTAAACATCGATCGCTACTATGCCCGC
GTGCTACCGCAAGATAAAGCCTCAATTATCCGCAGACTCAAAGCCGAAAAACCGACTGCGTTTGTGGGAGATGGGATTAA
TGATGCGCCTGCTCTCACCGAGGCAGATTTAGGACTCGCGATCGGGGCTGGAACCAATGTCGCGATCGAGTCCGCAGATT
TGGTATTAATTAATAGTAGTCCCCTCGATGCCACCTATGCATTGAAGTTGGCAAAAGCGACCTACAATAAAATGCTGCAA
AATCTATTTTGGGCAACGGGTTACAACGTCATTGGCATTCCTTTAGCCGCAGGGGTCGCTTATTCCTTCGGAATTTTGTT
ATCTCCAGCGGTGGGTGCTATCTTCATGAGCGTTTCGACTGTTGTTGTTTCGATTAATGCCATGTTATTACGTCGGCTTA
GACTCAGAGAAGAATGGCACTAA

Protein sequence :
MQRHHEQHGHQQPQQEYIGHDEHQRQLADARQDLHEARQQHSHHDRHAGHSPEIFQRRFFICLVLSLPVLYYAPMFQMWF
GYRAIAFPGSEWVAPILSTVIYFYGGWVFLRGAWREFHSKIGMMTLIALAITVAFIYSLAVSFGLRGEPFYWELVTLVDI
MLLGHWIEMASVQGASRALENLAELVPSVAHRLVNGRVEDVQVDTLQHNDLILVRPGEQIPIDGEVTEGASSVNEAFLTG
ESRPVTKQVNDEVVAGAVNGDGALTVKVTRTGEQTTLSQIVRLVEEAQSSKSRYQALADRLAYWLTLIAIAVATLTFIVW
LAFGPDSTFAINRAVTVLVIACPHALGLAIPLVIVNATAMSAKHGILVRSREAFERARNIQTIAFDKTGTLTEGQFGVQR
IYTDKIDELKALGIAATLESLSEHPLAQAIVQEADRRQIQFTKGEDFQAIPGSGVEGTVNNQRYRVGRPEWVRDLKLAFP
AALQAGLEQSESRGESAIVLMDEQQVLAVFGLADRVREPAREAVARLQEMGVQVVMITGDAEAVAKTVAEDLNIDRYYAR
VLPQDKASIIRRLKAEKPTAFVGDGINDAPALTEADLGLAIGAGTNVAIESADLVLINSSPLDATYALKLAKATYNKMLQ
NLFWATGYNVIGIPLAAGVAYSFGILLSPAVGAIFMSVSTVVVSINAMLLRRLRLREEWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 7e-92 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5648 YP_007100392.1 heavy metal translocating P-type ATPase BAC0629 Protein 8e-156 52
Chro_5648 YP_007100392.1 heavy metal translocating P-type ATPase BAC0383 Protein 4e-108 42
Chro_5648 YP_007100392.1 heavy metal translocating P-type ATPase BAC0101 Protein 7e-89 42
Chro_5648 YP_007100392.1 heavy metal translocating P-type ATPase BAC0183 Protein 1e-87 42
Chro_5648 YP_007100392.1 heavy metal translocating P-type ATPase BAC0079 Protein 3e-121 41