Gene Information

Name : Chro_5958 (Chro_5958)
Accession : YP_007100683.1
Strain :
Genome accession: NC_019699
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 354941 - 355627 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: rop:ROP_pROB01-01850 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: A

DNA sequence : 
ATGGTTGAAATGCTAGTTGAAGCGCAAAATCTCAGGCGCGTTTATCAACGGGGCGAGAATTCTGTGGTAGCTGTTGACTC
TGCTACATTTGCGATAACGTCAGGTGCGCGGATTGCCTTGATGGGACCATCGGGCAGCGGCAAGTCTACGCTACTTTATT
TAATGGGCGGTCTCGATACTCCCACATCTGGAAAAATTGCTTGGACGGCTCTTGGCGATCGCAAGTCTTTGCGCCCTCAA
AAGATCGCCTTCGTCTTTCAGATGCCCAGTCTTTTAGCTCCTCTAAATGTAGTAGAAAATGTAGCACTGCCGCTGCTACT
GGGAAACATAGAGCCTTATGTTGCCAGAAAAGCAGCAATGGAAGTATTGGAGCGCATAGGACTCAGCGCGATCGCTGACA
AAATGCCGGAAGAACTTTCTGGCGGACAGGCGCAGCGGGTAGCAGTGGCAAGGGCTTTAGTCTATCGTCCTCGGCTGATT
CTGGCAGACGAACCCACAGGTCAACTCGATCGCTCCACTGCCAAGCTGTTACTCGACGTGTTACTGGCAACTCTAGAAGG
TACGGACACGGCGCTAGTCGTCGCTACCCACGATCGAGCAGTTGCAGAGCGTCTCGATAGCTTGTGGTACGTCCGGCATG
GAAATCTCTTAACGAGCAGTAACAAACAATTAGCACTTGGCAATTAG

Protein sequence : 
MVEMLVEAQNLRRVYQRGENSVVAVDSATFAITSGARIALMGPSGSGKSTLLYLMGGLDTPTSGKIAWTALGDRKSLRPQ
KIAFVFQMPSLLAPLNVVENVALPLLLGNIEPYVARKAAMEVLERIGLSAIADKMPEELSGGQAQRVAVARALVYRPRLI
LADEPTGQLDRSTAKLLLDVLLATLEGTDTALVVATHDRAVAERLDSLWYVRHGNLLTSSNKQLALGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-22 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-22 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5958 YP_007100683.1 ABC transporter NC_008702.1.4606598. Protein 1e-18 43
Chro_5958 YP_007100683.1 ABC transporter NC_012469.1.7686878. Protein 3e-22 41