Gene Information

Name : Chro_5638 (Chro_5638)
Accession : YP_007100383.1
Strain :
Genome accession: NC_019699
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25004 - 25708 bp
Length : 705 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ana:all7584 tw

DNA sequence : 
ATGAGAATACTACTAGTTGAGGATGAACCAGATCTAGGATCTGCAATTAAGCGCACTTTACACCAGGAAAAGTATGTGGT
CGATCTGGTTTTAAATGGTACTGAAGCCTGGGAATATTTGGAAAATCAGCACGCACAGTATGCCTTGGCTATCCTTGACT
GGTCGTTACCTGGAATGTCAGGAATAGATCTTTGCCAGCGGTTGAGGAGGCAAAACAGCCCGTTACCAGTGTTGATCCTG
ACAGCTAGAGATAGTATCGAAGATAGAGTAACAGGTTTGGATGCAGGGGCAGATGACTATCTAGTAAAACCGTTTAGTAT
GGCGGAACTCCTAGCAAGGGTGAGGGCACTCCAGAGGCGATCGCCTCAGATTCTACCCCAAAAACTCCAAGCAGGTAATC
TAATTTTAGATTACGCTAACCGAAGTGTTTATCTGCTCGAACAAAGTGGCGATAAGCAGTTAGTATCGCTGACCAATAAG
GAATTTCAGCTACTAGAGTATTTTATGACACATCCGAATCGGATTGTTAGCAGCGAGCAGATTCGCAATCAGCTTTGGGA
AGTGAATGCAGATACGACTAGTAATGTAGTAGCTGCTCAAATTCGCTTGCTCAGACGACAACTTGCAGTCATAGGCAGCA
CTGACGCAATCGAAACTGTTCCTGGCAGGGGCTATCGCCTCAACATTCCCGATGCAACAAAATAA

Protein sequence : 
MRILLVEDEPDLGSAIKRTLHQEKYVVDLVLNGTEAWEYLENQHAQYALAILDWSLPGMSGIDLCQRLRRQNSPLPVLIL
TARDSIEDRVTGLDAGADDYLVKPFSMAELLARVRALQRRSPQILPQKLQAGNLILDYANRSVYLLEQSGDKQLVSLTNK
EFQLLEYFMTHPNRIVSSEQIRNQLWEVNADTTSNVVAAQIRLLRRQLAVIGSTDAIETVPGRGYRLNIPDATK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5638 YP_007100383.1 winged helix family two component transcriptional regulator BAC0288 Protein 2e-62 59
Chro_5638 YP_007100383.1 winged helix family two component transcriptional regulator BAC0083 Protein 4e-35 41
Chro_5638 YP_007100383.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5638 YP_007100383.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-27 41