Gene Information

Name : Cha6605_0990 (Cha6605_0990)
Accession : YP_007095759.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1070800 - 1072722 bp
Length : 1923 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-transloc

DNA sequence :
ATGTCTTCCCCTTCCCTGTCTAGATCCCGTTGGCAAGCACTACTTAAAGAATACCCAGATGCGATCGCGGCTGGCGTTTG
TGCGGTGCTGGTGTTGATAGGTTGGTTCACCCTAGATCGCGGCTGGTTGGGTTTTAGTTTGCTAATTCTAGCTGCCGCCT
ATGTCATTGGGGGATATCAAAACACTCTGGAAGGGTTGGGCACTTTGTGGCGAGAGAAAGAGCTAGATGTGGACTTATTG
ATGATTGTGGCAGCGTTGGGAGCGGCTGCTTTGGGGCTGTGGCGCAAGGAATACTACTTCATCGTCGATGGTGGGATGTT
GATTCTGATTTTTGCCATTAGCGGAGTACTGGAAGGCTATGCAATGAGCCGGACAGAGCGGAGCATTCAGGGATTGATGA
GCCTGACTTCTGATACTGCCCGCAAGCTTGTCGATGGGCAGGAACGAATGGTGTCGGTGGCTGAATTACAGCTTGGCGAT
CGAGTCTTGGTGAAGCCAGGAGAGTTGGTACCGACAGATGGGACGATCGTTGAGGGATCGAGCGAACTCAATCAAGCTCC
GATTACGGGGGAATCAATGCCCGTTGAAAAAACCGTTGGCGATGAGGTATTCGCAGGGACGATTAATGGGAACGGTGCGC
TCAAGATTCAGATCGATCGATCGCCAGAGAGTAGCCTAATTCAGCGGGTAATTCGGTTAGTAGAACAGGCGCAGACTGAA
ACACCTCCTTCTCAACAGTTCATCGAACGATTCGAGCGCGGTTATGCCAAAGCGATCGTCTTACTGGGCATTTTACTCGG
TACTTTACCACCATTTCTACTCGGCTGGACTTGGGAAGATACAGTTTATCGCGCCCTGATTTTTCTGGTAGTAGCTTCGC
CCTGTGCATTAATGGCAGCAACGATGCCAGCTCTATTATCGGGCATCGCGAATGGGGCGCGACATGGAATTTTGTTCAAG
AATGGGGCGCAGTTAGAAGCGATCGGACAAGTTCGAGCGATCGCCTTTGATAAGACTGGAACACTGACTACAGGCAAACC
TCAAGTCGTCCAAGTGATGGCGATCGAACATCCAGACAAATTGCTCCAAGTGGCTGCGGCTCTGGAAAACATGTCCGAGC
ATCCGATCGGAGCCGCGATCGTCCACGCAGCCCAGAAACAAGGCAGGGAATGGATTGAAGCCGTTAATGTTCGCTCTGAA
CCTGGACGGGGGATTAGTGGTAAAGTTGAGGGGAAAATAGCGGTAGTCGGTAAAGCCGCCTTTGTGCAAGCGCAAGCAGC
TAATTGTCCAGAATCGTTGGCAAAACAGAGTCAAAAGTGGGAGCAAGAGGGCAAAACTGTTGTCTGGGTTGCTTATGACA
ACAACATCTTGGGGATTATCGCCGTTGCTGATACCGTCAGAGCCACAGCCGCTCGATCGATCCGCCACTTAAAACGCTTA
GGGATCGATCGAATTGTGATGTTGACAGGTGATAATCAGCGTACCGCCGAGAATATCGCCCAGGAAATTGGGATCGATGG
GGTGTATGCCGAACTCCTACCTGAAGCTAAACTTGAAGTAATTCGCCAACTCCAGCAACAATATCAGTCGGTGGCGATGG
TTGGCGATGGAATTAATGATGCTCCGGCTCTGGCTCAAGCCTCTGTCGGGATTGCGATGGGGATTGTCGGCAGTGACGTG
GCACTAGAAACAGCGGATGTGGTATTAATGGCCGATCGGTTGGAAAAACTCGAATATGCCATTCGGCTGAGTCGTCGCTC
TGGGCAGATTGTCAAGCAAAACATCGTTTTTGCCCTCAGCTTTATTTTGATATTGCTAGTCGCCAATTTTACTGGCAATA
TGACCCTCCCATTAGGTGTCCTCGGTCATGAAGGATCGACCGTATTGGTGATTTTAAATGGTTTACGGTTGCTGAAAGAT
TAG

Protein sequence :
MSSPSLSRSRWQALLKEYPDAIAAGVCAVLVLIGWFTLDRGWLGFSLLILAAAYVIGGYQNTLEGLGTLWREKELDVDLL
MIVAALGAAALGLWRKEYYFIVDGGMLILIFAISGVLEGYAMSRTERSIQGLMSLTSDTARKLVDGQERMVSVAELQLGD
RVLVKPGELVPTDGTIVEGSSELNQAPITGESMPVEKTVGDEVFAGTINGNGALKIQIDRSPESSLIQRVIRLVEQAQTE
TPPSQQFIERFERGYAKAIVLLGILLGTLPPFLLGWTWEDTVYRALIFLVVASPCALMAATMPALLSGIANGARHGILFK
NGAQLEAIGQVRAIAFDKTGTLTTGKPQVVQVMAIEHPDKLLQVAAALENMSEHPIGAAIVHAAQKQGREWIEAVNVRSE
PGRGISGKVEGKIAVVGKAAFVQAQAANCPESLAKQSQKWEQEGKTVVWVAYDNNILGIIAVADTVRATAARSIRHLKRL
GIDRIVMLTGDNQRTAENIAQEIGIDGVYAELLPEAKLEVIRQLQQQYQSVAMVGDGINDAPALAQASVGIAMGIVGSDV
ALETADVVLMADRLEKLEYAIRLSRRSGQIVKQNIVFALSFILILLVANFTGNMTLPLGVLGHEGSTVLVILNGLRLLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-100 43
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-99 42
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-99 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0990 YP_007095759.1 copper/silver-translocating P-type ATPase BAC0092 Protein 0.0 72
Cha6605_0990 YP_007095759.1 copper/silver-translocating P-type ATPase BAC0099 Protein 3e-98 44
Cha6605_0990 YP_007095759.1 copper/silver-translocating P-type ATPase BAC0124 Protein 7e-89 42