Gene Information

Name : Cha6605_0925 (Cha6605_0925)
Accession : YP_007095709.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1023400 - 1024077 bp
Length : 678 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCAGCACATATTCTTTTAGTTGAAGATGAAGTTAAACTCGCCCGATTTATCGAACTGGAATTGGAGAGTGAGGGCTA
TCGCGTCAGTGTGGCACACGATGGGATGGCGGGACTTGCGCTGGCGCGGGAGTCGGCACCAGATCTAGCGATTTTGGATT
GGATGTTGCCAGGACTTACGGGCGTAGAACTCTGTCGGCGATTGCGATCGACTGGTATATCTATCCCCGTAATTTTACTA
ACAGCCAAAGATGAAGTGGGCGATCGCGTGACGGGTTTGGATGCTGGAGCCGATGATTATGTCGTCAAACCGTTTAGCAT
CGAAGAACTACTCGCACGCATCCGTTCTCATCTAAGACGTACCCAAAAAACCGACGAAGATCTGTTGCAATTTGAAGATT
TAACTTTAAATCGGCGGACTCGTGAAGTCCATCGCGGCGGTAGATCGATCGATTTAACAGCCAAAGAATTTGAGTTGTTA
CAATACCTATTGAGTCATCCACGTCAAGTATTTACTAGAGAGCAAATTATCGAAAATGTGTGGGGATTTGATTTTCTGGG
CGACTCAAATATTATCGAGGTTTATGTTAGATATCTCCGCACGAAGTTAGAGCAAAATAATGAGCCAAGATTGATTCATA
CCGCGCGGGGTGTTGGCTATGCTTTGCGGGAGCAATAG

Protein sequence :
MAAHILLVEDEVKLARFIELELESEGYRVSVAHDGMAGLALARESAPDLAILDWMLPGLTGVELCRRLRSTGISIPVILL
TAKDEVGDRVTGLDAGADDYVVKPFSIEELLARIRSHLRRTQKTDEDLLQFEDLTLNRRTREVHRGGRSIDLTAKEFELL
QYLLSHPRQVFTREQIIENVWGFDFLGDSNIIEVYVRYLRTKLEQNNEPRLIHTARGVGYALREQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-35 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 2e-46 50
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-45 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-48 48
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 5e-39 46
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-41 45
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 2e-41 45
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-41 45
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-39 44
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 8e-35 44
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 3e-40 43
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-36 42
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 7e-55 53
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 7e-36 45
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 1e-45 44
Cha6605_0925 YP_007095709.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 7e-41 44