Gene Information

Name : Cha6605_0660 (Cha6605_0660)
Accession : YP_007095463.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 708548 - 709279 bp
Length : 732 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCCTCGAATACTAGTCATCGATGATGATGCAGCGATCGCTGAAATAGTCTGTATTAACCTCGAAATGGCTGGATATGA
GGTGAATCAGTCGCCTGACGGTATTCAAGGTCAGGCAATGGCGATCCAAATCCAGCCTGATTTGATCGTGTTAGATTTGA
TGTTGCCCAAAGTTGATGGTTATACCGTTTGCCAAAGGTTGCGTCGTGACGAGCGCACTTCCGATATTCCAATCCTGATG
TTGACAGCTCTGAGTCAAACCCAGAATAAGGTCGAAGGGTTTAATGCTGGCGCGGATGACTATCTGACTAAACCGTTTGA
AATCGAGGAATTGTTGGCGCGCGTCCGCGCGCTGCTGCGGCGAACGGATCGGATTCCGCAAGCCGCCAAACACAGCGAAA
TTCTCAATTATGGGGAGCTGACGTTAGTCCCGGAAAGGTTTGAGGCGATTTGGCGCGGCGCGACGATCAAGCTCACGCAC
CTGGAATTCGAGCTGTTACACTGTCTGCTCCAGCGACACGGGCAAACTGTGTCGCCGAGCGACATTCTCCGCGAGGTATG
GGGTTACGATCCGGATGACGATATCGAGACAATTCGCGTCCACATCCGCCACCTGCGTACTAAGATGGAACCAGATCCGC
GTCGTCCGAAGTATATTAAGACGATCTACGGTGCGGGTTATTGTCTGGAGCTACAAAACGATCGAGAGGAAGAGAAAAGT
TCTGTGAGTTAA

Protein sequence : 
MPRILVIDDDAAIAEIVCINLEMAGYEVNQSPDGIQGQAMAIQIQPDLIVLDLMLPKVDGYTVCQRLRRDERTSDIPILM
LTALSQTQNKVEGFNAGADDYLTKPFEIEELLARVRALLRRTDRIPQAAKHSEILNYGELTLVPERFEAIWRGATIKLTH
LEFELLHCLLQRHGQTVSPSDILREVWGYDPDDDIETIRVHIRHLRTKMEPDPRRPKYIKTIYGAGYCLELQNDREEEKS
SVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 9e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 1e-33 43
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-29 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-33 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 8e-34 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 5e-30 42
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF310956.2.orf0.gene Protein 4e-26 41
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-26 41
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 9e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0660 YP_007095463.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 4e-29 44