Gene Information

Name : Cha6605_0635 (Cha6605_0635)
Accession : YP_007095439.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ATPase component of Mn/Zn ABC-type transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 683241 - 684017 bp
Length : 777 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAACGCAATTGGAATTGACATCAAAAATGTAACTGTTGCTTATCACGGTAAAGTCGCCCTTCATAGTGCATCGCTGCA
ACTTCAGAGCGGTTCGATTTGTGGGCTAGTGGGGATGAATGGAGCGGGAAAATCGACTCTATTTAAAGCAATTATGGGGT
TTGTCAAACCCGCTACTGGTAGAATTTTAGTTAACGGGTTACCGATTCATAAAGCGCAGAAAAATAATCTCGTCGCCTAC
GTACCCCAGTCCGAAGAAGTAGACTGGAACTTCCCCGTTAGCGTTGCCGACGTAGTGATGATGGGGCGATATGGATATAT
GAATATCTTGCGAATTCCTGGATCTAGAGATAAGCAAGCAGTTAGAGAAAGCTTAGAACGCGTGCAGATGTGGGCTTTAC
GCGATCGACAAATTGGCGAATTATCTGGCGGGCAAAAGAAACGGACATTTTTTGCTAGGGCACTAGCGCAGCAAGCCCAA
GTTTTATTATTAGACGAACCATTTGCAGGTGTAGATGTCAAGACCGAAAAAATGTTAATTGACTTACTCCTCCAATTGCG
AGAACGCGGACATACAATTCTAATTTCAACTCACGATTTAGCCTCAATTAAAACATTTTGCGATCGAGTGGTTCTCATCA
ATCGCAGTATTCTGGCATATGGTAATACCTCAGATGTATTTACTCCAGAAAATATTGCCCGTGCCTTCGATAATTCACTT
GGAGATTTATCGAACCTTACCAGCCAGTTAAATAGCACAAATCGGGAGCTAGAATAA

Protein sequence : 
MNAIGIDIKNVTVAYHGKVALHSASLQLQSGSICGLVGMNGAGKSTLFKAIMGFVKPATGRILVNGLPIHKAQKNNLVAY
VPQSEEVDWNFPVSVADVVMMGRYGYMNILRIPGSRDKQAVRESLERVQMWALRDRQIGELSGGQKKRTFFARALAQQAQ
VLLLDEPFAGVDVKTEKMLIDLLLQLRERGHTILISTHDLASIKTFCDRVVLINRSILAYGNTSDVFTPENIARAFDNSL
GDLSNLTSQLNSTNRELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-57 57
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-57 57
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-57 57
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-56 57
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-56 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0635 YP_007095439.1 ATPase component of Mn/Zn ABC-type transporter BAC0440 Protein 4e-62 58
Cha6605_0635 YP_007095439.1 ATPase component of Mn/Zn ABC-type transporter BAC0350 Protein 1e-57 57
Cha6605_0635 YP_007095439.1 ATPase component of Mn/Zn ABC-type transporter BAC0400 Protein 2e-40 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_0635 YP_007095439.1 ATPase component of Mn/Zn ABC-type transporter VFG0526 Protein 1e-57 57