Gene Information

Name : Cha6605_5711 (Cha6605_5711)
Accession : YP_007100095.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : urease, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6023286 - 6024983 bp
Length : 1698 bp
Strand : -
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGGATCGCCGCGCCTACGCTCAAACCTACGGGCCGACTACAGGCGATCGCGTCCGCCTTGCAGATACCGAATTATTCAT
CGAAATCGAGCGCGATTTTACGACTTATGGGGATGAAGTTAAATTTGGCGGCGGCAAGGTAATTCGGGATGGAATGGGAC
AATCGCCGATTTCTAATGCTGATGGTGCAGTAGATTTGGTGATTACCAATGCCGTGATTCTGGATTGGTGGGGCATCGTC
AAAGCTGATGTCGGCATTAAGGATGGCAAGATTTACAAAGTCGGCAAAGCCGGAAATCCTTATATTCAAGATAACGTCGA
TATAATTATCGGCCCAGGCACCGAAATTATCGCCGGGGAGGGGTCGATTTTGACGGCGGGGGGTATCGATACCCACATTC
ATTTTATCTGCCCTCAACAGATTGAAGTGGCGATCGCGTCCGGTATTACCACCATGATTGGTGGCGGTACGGGGCCAGCA
GCCGGAACTCATGCTACTACCTGTACTCCTGGCGTCTGGAATATGTACCGGATGTTGCAGGCGGTGGATGCTTTTCCGAT
GAATATCGGCTTGTTGGGCAAGGGCAATAGCTCTCAGCCGCAAGGTTTAGTCGAGCAAGTCCAAGCAGGTGCGATCGGGT
TAAAATTGCATGAAGATTGGGGAACTACACCCGCCACGATCGATACTTGTCTGAGCGTCGCGGATGAATATGATGTCCAA
GTGGCAATTCACACCGATACCCTCAACGAAGCCGGATTTGTCGAAACCACGATCGGTGCTTTTAAAGGTAGAACGATTCA
CACCTATCATACCGAAGGCGCGGGCGGCGGACACGCCCCAGATATCATCCGCGTCTGTGGCGAAGCCAATGTCTTGCCCT
CTTCTACCAATCCCACTCGTCCCTACACGCTCAATACCCTCGACGAACATTTGGATATGTTGATGGTGTGTCACCATCTC
AGTCCCAGTATTCCCGAAGATGTTGCCTTTGCCGAGTCGAGAATTCGCCGCGAAACGATCGCCGCTGAAGATATTCTCCA
CGATTTGGGCGCATTTAGTATGATTTCTTCCGATTCCCAGGCGATGGGGCGAATTGGCGAAACAATTATTCGGACGTGGC
AAACCGCCCACAAAATGAAAGTCCAACGCGGTGGTTTACCTCAAGATAGTCAACCAGCCGATAATTTACGTGCCAAACGC
TATATTGCTAAATATACAATCAACCCCGCAATTACTCATGGTATCTCTAATTATGTGGGTTCGATCGAGTCTGGTAAGAT
TGCCGATTTATGTTTGTGGAAACCTGCATTTTTTGGCATCAAACCAGAGACAGTAATTAAAGGTGGGCTGATAGCCTGGG
CGCAGATGGGCGATGCCAATGCCAGTATTCCCACACCCCAACCCGTCCACATGCGCCCAATGTTTGGCAGTTATGGTGGT
GCAAGAACTAATACTGCTTTTACGTTTCTGTCTCAAGTAGCAATGGAACGAGAGCTAGCACAACAATTACAGTTGCAAAA
ACAGGTACTAGCGGTATCGGGAACTCGTCAAGTTAGCAAGCGGGATATGAAGTTAAATGATGCGTTACCTCGGATCGAAG
TCAATCCCGAAACTTATGAGGTAAGAGCCGATGGAGAGTTACTTACTTGTGAGCCTGCAACTGTTTTACCGATGGCGCAG
CGTTATTTCTTATTCTAG

Protein sequence :
MDRRAYAQTYGPTTGDRVRLADTELFIEIERDFTTYGDEVKFGGGKVIRDGMGQSPISNADGAVDLVITNAVILDWWGIV
KADVGIKDGKIYKVGKAGNPYIQDNVDIIIGPGTEIIAGEGSILTAGGIDTHIHFICPQQIEVAIASGITTMIGGGTGPA
AGTHATTCTPGVWNMYRMLQAVDAFPMNIGLLGKGNSSQPQGLVEQVQAGAIGLKLHEDWGTTPATIDTCLSVADEYDVQ
VAIHTDTLNEAGFVETTIGAFKGRTIHTYHTEGAGGGHAPDIIRVCGEANVLPSSTNPTRPYTLNTLDEHLDMLMVCHHL
SPSIPEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRIGETIIRTWQTAHKMKVQRGGLPQDSQPADNLRAKR
YIAKYTINPAITHGISNYVGSIESGKIADLCLWKPAFFGIKPETVIKGGLIAWAQMGDANASIPTPQPVHMRPMFGSYGG
ARTNTAFTFLSQVAMERELAQQLQLQKQVLAVSGTRQVSKRDMKLNDALPRIEVNPETYEVRADGELLTCEPATVLPMAQ
RYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-175 70
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-175 70
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 8e-162 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 1e-161 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-161 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-161 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_5711 YP_007100095.1 urease, alpha subunit VFG0270 Protein 2e-146 62