Gene Information

Name : Cha6605_5497 (Cha6605_5497)
Accession : YP_007099906.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5818207 - 5820219 bp
Length : 2013 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGCCTGTAACCGCTCAATCTTTAGACCAACTTGCTATTAATTCAATTCGTTTTCTCGCTGTAGATGCGATCGAGAAAGC
AAAATCCGGTCACCCAGGTTTACCGATGGGTGCGGCTCCGATGGCATATGTACTGTGGCAAAATTTCATGCGGTACAACC
CCAAGAACCCCCAATGGTTCAACCGCGATCGGTTCGTACTCTCTGCTGGACACGGTTCGATGCTGCAATATGCCCTGTTG
CACCTAACTGGCTACGATAGCGTCAGTATCGAAGATATCAAGAACTTCCGTCAGTGGGGTTCGAGCACTCCCGGACACCC
CGAAAACTTTGAGACTGCGGGTATTGAAGTAACCACTGGCCCGCTCGGACAAGGGATTGCAAATGGTGTCGGCTTGGCTT
TAGCTGAAGCGCACCTAGCGGCTAAATATAACAAACCCGATGCCACCATCGTCGATCATTACACTTACGTCATCGTCGGC
GATGGTTGTAATATGGAAGGCATTTCCGGCGAAGCCGCTTCGATCGCGGGTCACTGGGGCTTAGGTAAGCTAATTGTCTT
GTATGATGACAACCACATCTCGATCGATGGTTCGACCGATGTTGCCTTTACTGAAGATGTCTCCAAGCGATTTGAAGCTT
ACGGGTGGCACACCATCCACGTTGAAGATGGTAACACTGACTTAGCCGCGATTTCGGCAGCTCTAGAAGAAGCTAAGAAA
GTCACCGACAAACCCACGATGATCAAAGTCACCACGATCATCGGTTACGGCTCCCCCAACAAATGCAACACAGCAGGCAT
CCACGGTGCGGCTCTCGGTGGTGATGAAGTCAAACTCACCCGCGAGAATCTCGGCTGGGAATACGCTCCGTTTGAATTAC
CCGCCGATGCCGTCGCTCACATGCGCGAAGCAATCGATCGCGGTGCCAAATATGAAGGCGAATGGGAAGCAACTCTAGCT
ACCTACAAATCCAAATATCCTCAAGAAGCTGCCGAATTTGAAGGCTTGCTCACTCGCCAACTCCCTGCTGGTTGGGATAG
CGTCTTGCCTACCTATACCCCCGAAGATAAACCAGTCGCTTCGCGCAAACACTCGGAAATTTGCCTCAACAAACTCGCTC
CCGTTTTACACGGCTTAATCGGCGGTTCGGCTGACTTAACCCACTCCAACCTCACCGAAATCAAAGGTTCTGGCGATTTC
CAAAAAGACGCATACCAAAATCGTAACGTCCACTTCGGCGTGCGCGAACATGCCATGGGTGCGATCTGTAACGGGATGGC
TCTCCACAACTCCGGTTTGATTCCTTACGGTGCGACCTTCTTAATCTTCACCGACTACATGCGCGCCGCGATTCGCCTCT
CCGCATTGTCTCAAGTCGGTACATTGTGGGTAATGACTCACGATTCGATCGGTCAAGGTGAAGATGGCCCCACGCACCAA
CCGATCGAAACGATCGCCTCCTTGCGCGCTATCCCCAACCTCACCGTCATTCGTCCCGCCGATGGTAACGAAACCTCTGG
CGCGTACAAAGTTGCGATCGAGAAAGCCAGCCAACAAGCTCCCACCCTCCTCGCATTATCCCGTCAAAATCTACCTAACT
TAGCCGGAACTTCGATCGAAGGTGTAACTAAAGGTGCTTACACGATTGTCGATTCCCAAGGTACTCCCGATATCATTTTG
ATCGGAACGGGTTCCGAAGTCAGCTTGTGCGTCTCTGCGGCTGAAAAACTCACCGCTGAAGGCAAAAAAGTCCGCGTTGT
CTCCATGCCTTCGTGGGAGTTATTCGACGCTCAAGATGCCGCTTACCAAGAATCTGTCTTACCTAAGGCAGTTACCAAAC
GCGTCGCTGTCGAAGCTGCTTGCAGCATGGGTTGGCACCGTTTCGTCGGTATGGATGGCGGTTTAGTCACAGTCGATCGT
TTTGGTGCTTCGGCTCCAGGTGGCGTAGTGATGGAGAAATATGGTTTCACAGTCGATAACGTCGTTGCTACAGCCAAGAA
AGTTTTAGGTTAA

Protein sequence :
MPVTAQSLDQLAINSIRFLAVDAIEKAKSGHPGLPMGAAPMAYVLWQNFMRYNPKNPQWFNRDRFVLSAGHGSMLQYALL
HLTGYDSVSIEDIKNFRQWGSSTPGHPENFETAGIEVTTGPLGQGIANGVGLALAEAHLAAKYNKPDATIVDHYTYVIVG
DGCNMEGISGEAASIAGHWGLGKLIVLYDDNHISIDGSTDVAFTEDVSKRFEAYGWHTIHVEDGNTDLAAISAALEEAKK
VTDKPTMIKVTTIIGYGSPNKCNTAGIHGAALGGDEVKLTRENLGWEYAPFELPADAVAHMREAIDRGAKYEGEWEATLA
TYKSKYPQEAAEFEGLLTRQLPAGWDSVLPTYTPEDKPVASRKHSEICLNKLAPVLHGLIGGSADLTHSNLTEIKGSGDF
QKDAYQNRNVHFGVREHAMGAICNGMALHNSGLIPYGATFLIFTDYMRAAIRLSALSQVGTLWVMTHDSIGQGEDGPTHQ
PIETIASLRAIPNLTVIRPADGNETSGAYKVAIEKASQQAPTLLALSRQNLPNLAGTSIEGVTKGAYTIVDSQGTPDIIL
IGTGSEVSLCVSAAEKLTAEGKKVRVVSMPSWELFDAQDAAYQESVLPKAVTKRVAVEAACSMGWHRFVGMDGGLVTVDR
FGASAPGGVVMEKYGFTVDNVVATAKKVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-152 53
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-153 53