Gene Information

Name : Cha6605_4572 (Cha6605_4572)
Accession : YP_007099018.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4842560 - 4843306 bp
Length : 747 bp
Strand : +
Note : PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence :
GTGTCAGATTTACTAGCAGGACAAGTGGCGATCGTGACAGGCGCATCGAGAGGAATCGGTCGCGCGATCGCGATACAATT
AGCGCAAGTTGGCGCGAAAGTCGCCGTAAATTATGCTAGCTCTAGCGGTGCTGCCGATGAATTGGTCGCTCAAATTATTG
GTAATGGTGGTGAGGCAATAGCTGTTGGTGCGGATGTTTCTAAACCAGAGCAAGTTGAGGCACTAGTCAGCACGGTAATG
GATAAATGGGGACGAATTGACGTCCTCGTCAATAATGCGGGGATTACACGCGATACTCTGCTATTGCGGATGAAGCTAGA
AGATTGGCAAGCAGTCATCGATACTAACCTCACAGGCGTGTTTTCTTGCACCCGCGCGGTAAGTAAAATAATGCTCAAAC
AAAAGTCAGGCAGAATTATTAATATCGCTTCAGTAGCCGGACAAATGGGCAATCCTGGGCAAGCAAACTATAGCGCGGCT
AAAGCTGGCGTCATCGGCTTTACCAAGACGGTAGCCAAGGAATTATCCACGCGAGGAATCACTGTCAATGCCGTAGCACC
AGGGTTTATAGCTACCGACATGACTAACGATCTCAAAGCCGAAGGGATTTTGCAATTCATTCCCCTTGGTAGATACGGAC
AACCCGAAGAAGTCGCAGGGATGGTGAGATTTTTGGCAGCAGATCCGGCGGCAGCATATATTACAGGTCAAACATTCAAT
GTCGATGGTGGGATGGTAATGGCGTAG

Protein sequence :
MSDLLAGQVAIVTGASRGIGRAIAIQLAQVGAKVAVNYASSSGAADELVAQIIGNGGEAIAVGADVSKPEQVEALVSTVM
DKWGRIDVLVNNAGITRDTLLLRMKLEDWQAVIDTNLTGVFSCTRAVSKIMLKQKSGRIINIASVAGQMGNPGQANYSAA
KAGVIGFTKTVAKELSTRGITVNAVAPGFIATDMTNDLKAEGILQFIPLGRYGQPEEVAGMVRFLAADPAAAYITGQTFN
VDGGMVMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-33 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-31 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-32 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 3e-32 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-32 42