Gene Information

Name : Cha6605_4082 (Cha6605_4082)
Accession : YP_007098565.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4291996 - 4292886 bp
Length : 891 bp
Strand : -
Note : PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain

DNA sequence :
ATGGAACTTCGTCACTTACGTTATTTTAGTACTGTTGCTACCGAATTGCACTTCGGACGTGCGGCAGAAAAATTGCACAT
CGCGCAACCACCTTTGAGCAAACAAATTCAAGACTTAGAAGCAGAGTTGGGTTTTGAACTATTCACGCGAACTAAAAGAT
CGGTGGCACTTACTCCTGCCGGACAAGCATTTTTAATTGAAGTGAGTCAAGTATTTCAACAACTCGATCGCGCGATCGAT
ATTGGTGGTAAAACTAGTCGCGGCGAACTCGGACAAATCTCGATCGGATTTGTGGGTTCGGCGACTTATAATATTTTACC
AGTGATGCTCCAACAGTTCCACGATCGATATCCTCAAGTCCAAATTAAACTACATGAGTTGACGACAGATCGGCAGTTAA
TTTGGTTGCGAGAAGGGAGAATCGATATTGGTTTGATCCGTCCGCCAATTGTGGAGCGAGATTTTGTCAGCCAAGTCATT
TTTCAAGAATCTGTAGTTGTGGCTTTACCAACTCATCATCATTTAGCAACGCAAGACTCGCTCGATCTCGCTACATTAGC
AACCGAACCGTTTATTCTGTTCCCCCGCAAACTCGCACCAGGATTGTACGATCCGATTATTGCTATTTGTCAAGCTGCTG
GCTTTAGTCCGCTGGTAGTTCAAGAATGTATCCAAATGCAGACGATCGTCAGTCTTGTCTCGGCAAATATGGGTGTTTCA
ATTCTACCAGAATCGATTCAAGAAGCCCAACGTCAAGGAGTAGTTTATAAGCCGATTAGATCGGAGTCTTTGAGCGTAGA
GAAGTTAGCTACAATTGCGATCGTCTGGCGACGCAACGATCCTTCACCGACAATGAATAAATTACTAGAAATCGCCTTAA
ATGAAATCTGA

Protein sequence :
MELRHLRYFSTVATELHFGRAAEKLHIAQPPLSKQIQDLEAELGFELFTRTKRSVALTPAGQAFLIEVSQVFQQLDRAID
IGGKTSRGELGQISIGFVGSATYNILPVMLQQFHDRYPQVQIKLHELTTDRQLIWLREGRIDIGLIRPPIVERDFVSQVI
FQESVVVALPTHHHLATQDSLDLATLATEPFILFPRKLAPGLYDPIIAICQAAGFSPLVVQECIQMQTIVSLVSANMGVS
ILPESIQEAQRQGVVYKPIRSESLSVEKLATIAIVWRRNDPSPTMNKLLEIALNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 8e-50 41