Gene Information

Name : Cha6605_3975 (Cha6605_3975)
Accession : YP_007098464.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4185981 - 4187735 bp
Length : 1755 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCAATTGCGAGATTCCCTCCGCCGAACTAAGATTGTTGCTACCATCGGCCCCGCAACTAGTCGCCCTGAAGTCCTGAA
ACAATTGATTCAAGCGGGAGCCACGACTCTGCGACTCAATTTTTCTCATGGTACTCACGACGACCATCTAGCCAATATTC
GCCTAATCAGGCAAATATCTTTTGAACTCAATCAGCCCGTTGGGATCTTACAAGATTTACAGGGGCCAAAAATTAGATTG
GGCAAATTTGCCGATGGTTCGATCGTCCTAAAAAATGGGGATCCGTTCACGCTTACCAGCAAAATTATCCTTGGTACCCA
GACAATTAGTTCGGTAACTTACGATACACTTGCCGAAGAAGTACCCGTCGGATCGACGATTTTGCTCGATGATGGTAAGG
TCGAAATGGTAGTTACCGCTGTCGATCGAGATACCAGCGAACTGCACTGTGAAGTAGTCGTGGGCGGCACTTTATCTAAT
AATAAGGGCGTCAATTTTCCCGGCGTTTACCTGTCGATCAAAGCTTTAACCGATAAAGACCGTCAGGATCTGATGTTCGG
ACTCGATCAAGGCGTAGACTGGGTAGCCCTCAGCTTCGTTCGCAATCCTGCCGATATCCATGAAATTAAAGAATTAATTG
CCAATGCAGGCAAAGAAGTCCCCGTCATTGCCAAAATCGAGAAGCACGAAGCGATCGAGCAAATGGAAGCGATCCTTTCG
CTGTGCGATGGCGTGATGGTAGCACGGGGCGACTTAGGCGTAGAACTACCTGCCGAACAAGTCCCCAGAATCCAAAAACA
ACTGATTGCCACTGCTAACCGATTGGGGATTCCGATTATTACGGCGACCCAAATGCTCGATAGTATGGTTACCAATCCAC
GCGGTACTCGCGCCGAGATTTCGGACGTCGCCAATGCGATTTTAGACGGTACCGATGCGGTGATGCTCTCTAACGAAACC
GCTGTCGGCATTTATCCGATCGAAGCCGTGCAAACGATGGCGAGAATTGCCCTCGAAACCGAGAAAGAAAAACTCTCCAA
ACGCTGGGAAGATAATAAGCGATCGATTCCCAATGCCATCAGCGAAGCCGTAGGCAATATTGCCGAACAACTCGGAGCCG
CCGCCATCATCCCCTTTACCAAAACTGGAGCCACCGCTCGTAGCGTTTCCAAATTTCGTCCATCTAAGCCAATTCTGGCC
GTCACACCCCATGTAGATGTCGCTCGCAGACTTCAGCTCGTTTGGGGAGTTCAACCCATGCTCCTGCTCGATTTAGCCAA
CGTAAATGACAATTTTCAAGCCGCCATCAACATGGCACGGACGAGCAATCTGATCCACGAAGGCGATTTGGTCGTTATTA
CCTCCGGTACTCAAGGCGTCGCTGGTTCGACAGATTTAGTCAAAGTCGAGGTCGTCACAGCGATTTTGGGACAAGGGATC
GGCATCGGACATGGTTTGGTTACTGGCGTCGCCCACATCGCCCGATCGCCTAGAGATGTAGCTCACTTCAATAAAGGTGA
TATCTTGATTGCCAAGACTACCAATGCCGAGTATCTAGATGCTATCCGCAAAGCCAGCGCGATCGTGGTCGAAGATGAGG
GTTTAACCTGCCATGCCGCAGTCTTAGGATTGCGATTGGACATTCCCACGATCGTGGGTGTCAAAGATGCCACCAGCAGC
ATTCACGGCGGCAAAGTAGTAACACTCGACGTTCAACGTGGGTCGATTTATTCTGGCGCGATTAGTTTTAATTAA

Protein sequence :
MQLRDSLRRTKIVATIGPATSRPEVLKQLIQAGATTLRLNFSHGTHDDHLANIRLIRQISFELNQPVGILQDLQGPKIRL
GKFADGSIVLKNGDPFTLTSKIILGTQTISSVTYDTLAEEVPVGSTILLDDGKVEMVVTAVDRDTSELHCEVVVGGTLSN
NKGVNFPGVYLSIKALTDKDRQDLMFGLDQGVDWVALSFVRNPADIHEIKELIANAGKEVPVIAKIEKHEAIEQMEAILS
LCDGVMVARGDLGVELPAEQVPRIQKQLIATANRLGIPIITATQMLDSMVTNPRGTRAEISDVANAILDGTDAVMLSNET
AVGIYPIEAVQTMARIALETEKEKLSKRWEDNKRSIPNAISEAVGNIAEQLGAAAIIPFTKTGATARSVSKFRPSKPILA
VTPHVDVARRLQLVWGVQPMLLLDLANVNDNFQAAINMARTSNLIHEGDLVVITSGTQGVAGSTDLVKVEVVTAILGQGI
GIGHGLVTGVAHIARSPRDVAHFNKGDILIAKTTNAEYLDAIRKASAIVVEDEGLTCHAAVLGLRLDIPTIVGVKDATSS
IHGGKVVTLDVQRGSIYSGAISFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-86 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-86 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-86 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-86 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_3975 YP_007098464.1 pyruvate kinase VFG0479 Protein 1e-86 44