Gene Information

Name : Cha6605_3762 (Cha6605_3762)
Accession : YP_007098260.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3951127 - 3952236 bp
Length : 1110 bp
Strand : -
Note : PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD

DNA sequence :
ATGCAATCTACAGAATTCGATCGCCAGATGATGCAACGATGTGTGCATCTTGCCAAACAAGCTTGGGGAAAGACCGCCCC
TAATCCCCTTGTCGGCGCGGTAATTGTCAAAGATGGCGAAGTTGTCGGCGAAGGTTTTCATCCCGGCGCAGGGCAGCCTC
ATGCCGAAGTATTTGCATTGCGGGCAGCGGGGGATAGGGCGCGTGGAGCGACAATTTATGTCAGCCTCGAACCTTGCAAT
CATTACGGTAGAACTCCCCCCTGCGCAGCGGCTCTAGTAGCGGCGGGAATTGGCAAAGTAGTTGTCGGGATGATAGATCC
CAATCCGCTCGTTTCTGGCGGCGGTATTGCTACGCTACAGCAGGCTGGCATCGAGGTAGTCGTTGGGGTAGAAACAGCAA
CGTGTGAAGAACTTAATGAAGGATTCGTGCAGCGGATCGTCCATCGTCGTCCGTTGGGGATTCTCAAATATGCCATGACG
CTCGATGGTAAAATTGCCACCGATAGCGGACATAGTACGTGGGTGAGCAGCGAGCCATCTCGTCATTACGTTCATCATTT
GCGTGCGGGGTGTGATGCGATCGTTATTGGTGGGAATACCTTACGTAGGGACAACCCCTACCTCACCAGTCACGATCCCG
ATGCACCCAATCCTCTGCGAGTGGTGATGACTCGCAGTCTGGATGTGCCGCTAGACGCAATTTTGTGGGACATCAGTGTC
GCGCCCACTTTAGTAGTAACTAAAATTGGTGTCAATCCCGAAACATTAGCACGATTGCGCGATCGCGGCGTCCAAGTCTT
AGAATTAGATGCTCTCAAACCAGTGCAGGTAATGCAACATCTTTACGATCGCGGTTGCTTGTCGGTATTGTGGGAATGCG
GCGGGACTTTAGCCGCTAGTGCAATCGCTGATGGTGCGATTCAGAAAGTATTAGCCTTTATCGCGCCTAAAATTGTCGGC
GGGAGTTCGGCACCTTCGCCAGTCGGCAATCTGAATATTCGATCGATGTCTGATGCAATGGTATTAGAACGGGTATCTTG
GCAACAAATCGGGACAGATATTTTAATACAGGGTTATCTAGATAAATCGGAACAGAAGTTAGACTTTTGA

Protein sequence :
MQSTEFDRQMMQRCVHLAKQAWGKTAPNPLVGAVIVKDGEVVGEGFHPGAGQPHAEVFALRAAGDRARGATIYVSLEPCN
HYGRTPPCAAALVAAGIGKVVVGMIDPNPLVSGGGIATLQQAGIEVVVGVETATCEELNEGFVQRIVHRRPLGILKYAMT
LDGKIATDSGHSTWVSSEPSRHYVHHLRAGCDAIVIGGNTLRRDNPYLTSHDPDAPNPLRVVMTRSLDVPLDAILWDISV
APTLVVTKIGVNPETLARLRDRGVQVLELDALKPVQVMQHLYDRGCLSVLWECGGTLAASAIADGAIQKVLAFIAPKIVG
GSSAPSPVGNLNIRSMSDAMVLERVSWQQIGTDILIQGYLDKSEQKLDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-41 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-41 44