Gene Information

Name : Cha6605_3587 (Cha6605_3587)
Accession : YP_007098100.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3776896 - 3777930 bp
Length : 1035 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGCGCAAGATTAACAATCGCTTTTTATATATGTCTGCTAATATCGCTAACTCCACCCAGACGATCCGCATCGCTTCGCG
GAAAAGTCAGCTAGCATTGGTGCAAACCTATTGGGTGCAAGCCCAATTACAGAAGCATTTTCCAGATCGCACCTTTGAAG
TCGAGATGATGAGTACCCAAGGGGATAAAATTCTCGATGTACCGCTGGCGAAAATTGGCGATAAGGGATTGTTTACTAAG
GAACTAGAAGTTAAAATTCTCGATCGATCGGCAGATCTCGCCGTACACTCACTCAAAGATCTCCCTACCAATTTACCAGA
AGGTTTGATGCTCGGTTGTGTTACCGAGCGAGAAAACCCAGCAGACGCGCTCGTTGTCAATGCCAAACATGCTGGCGCAC
AGCTCGAAACGCTGCCCCCAGGTGCTGTCATCGGGACATCTTCGCTGCGGCGATTGGCGCAACTCCGCCATCATTTTCCT
CACTTTGTCTTCAAAGACGTTCGGGGCAATGTCAATACTCGCTTAGCCAAACTCGATGCTGGTGAATATGATGCGCTGAT
TCTGGCCGCAGCGGGCTTACAACGCTTAGATTTTGGCGATCGCATTCACCAGCTCATTCCTGCTGAGTTGTCGCTTCATG
CGGTCGGACAAGGGGCACTGGGCATCGAATGTCGGACTGAAGATCCGGAGATCCTAGAAATACTCCAAACTTTACAACAC
CAACCGACGGCTTACCGCTGTTATGCCGAACGCGCCTTCCTCCGCGAACTAGAAGGCGGTTGTCAAGTCCCGATCGGGGT
TAACACTACCATCGATGGTGACAATTTGACTCTCGTCGGTATGGTATCTAGTCTAGACGGTCAAAGACTAGTTACAGATA
CAATTACTGGAGCAGCTATAAATGCCGAACAACTCGGCAAAGATCTCGCACATCGGCTTCGCTCTCAAGGCGCACAAACC
ATTCTCGATGAAATCTTTGCCCTCGTCGAACGAGACGGTTTGAAGAAAGTGCTGGACGAGCAGACGAATAGTTAG

Protein sequence :
MRKINNRFLYMSANIANSTQTIRIASRKSQLALVQTYWVQAQLQKHFPDRTFEVEMMSTQGDKILDVPLAKIGDKGLFTK
ELEVKILDRSADLAVHSLKDLPTNLPEGLMLGCVTERENPADALVVNAKHAGAQLETLPPGAVIGTSSLRRLAQLRHHFP
HFVFKDVRGNVNTRLAKLDAGEYDALILAAAGLQRLDFGDRIHQLIPAELSLHAVGQGALGIECRTEDPEILEILQTLQH
QPTAYRCYAERAFLRELEGGCQVPIGVNTTIDGDNLTLVGMVSSLDGQRLVTDTITGAAINAEQLGKDLAHRLRSQGAQT
ILDEIFALVERDGLKKVLDEQTNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-61 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-61 52