Gene Information

Name : Cha6605_3534 (Cha6605_3534)
Accession : YP_007098051.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3717717 - 3719096 bp
Length : 1380 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGCGTGCTGAATGGATTGCCAAACGTAGCGGACAAGCCAATGTGTCCCAGATGCACTATGCGCGTCAGGGAGTAGAAAC
CGAAGAAATGCAGCATGTCGCCAAGCGCGAAAACCTGCCCGTGGATCTGATCCGCGCGGAAGTCGCTCGCGGACGGATGA
TTATCCCTGCAAATACCAATCATCTCAATCTCGAACCGATGGCGATCGGGATTGCTTCTAAGTGTAAAGTGAATGCCAAT
ATCGGTGCGTCGCCTAACTCTTCTAACATGCAAGAAGAAGTCGATAAACTGATCCTCGCTGTCAAATACGGTGCCGATAC
CGTGATGGATCTCTCCACTGGTGGCGGTAATTTAGATGAAATTCGGATCGAAATCATCAAAAATTCGCCCGTACCCATTG
GTACCGTACCCATTTATCAGGCATTAGAAAGCGTCCACGGTAATGTCGAAAATCTCACTCCCAACGATTTTCTGCACATT
ATCGAAAAACATGCCCAGCAAGGGGTAGACTATCAAACCATCCACGCTGGCATTCTAATCGAACATTTACCGCTCGTTCG
CAATCGGATTACAGGTATCGTCTCCCGTGGCGGTGGGATTTTAGCACGGTGGATGCTGCATCACCACAAGCAAAACCCCC
TCTACACCCACTTCGACGACATCATCGAAATCTTCAAGAAATGCGATGTGTCATTTAGTTTGGGCGACTCCCTGCGTCCT
GGTTGTACCCACGACGCATCTGACGAAGCGCAACTAGCCGAACTCAAAACCCTCGGTAACCTCACCCGTCGCGCCTGGGA
ACATGACATCCAAGTGATGGTAGAAGGCCCCGGACACGTTCCGATGGATCAAATCGAGTTCAACGTCAAAAAGCAGATGG
AAGAGTGCTCTGAGGCTCCTTTCTACGTCTTAGGGCCACTTGTCACCGACATCGCACCCGGTTACGACCATATCACCTCC
GCGATCGGCGCGGCAATGGCTGGCTGGTACGGTACCGCGATGCTCTGCTACGTGACGCCCAAAGAACACCTGGGCTTACC
CAATGCTGAAGATGTCCGCAACGGTCTGATCGCCTACAAAATTGCCGCTCACGCTGCCGATATCGCCCGCAAACGTCCGG
GGGCACGCGATCGCGATGACGAGCTGTCTACAGCGCGTTACAACTTCGATTGGAATCGTCAATTTGAACTTTCTCTCGAC
CCCGAACGGGCGAAGGAATATCACGACGAAACTCTCCCCGCAGACATCTACAAAACTGCCGAGTTCTGTTCGATGTGTGG
GCCGAAGTTCTGTCCGATGCAAACTAAAGTCGATGCAGAAGCATTGACGGAATTAGAGAAGTTCTTAGCTAAAGAAAAAG
AACCTTCGAGTATCGGTTAA

Protein sequence :
MRAEWIAKRSGQANVSQMHYARQGVETEEMQHVAKRENLPVDLIRAEVARGRMIIPANTNHLNLEPMAIGIASKCKVNAN
IGASPNSSNMQEEVDKLILAVKYGADTVMDLSTGGGNLDEIRIEIIKNSPVPIGTVPIYQALESVHGNVENLTPNDFLHI
IEKHAQQGVDYQTIHAGILIEHLPLVRNRITGIVSRGGGILARWMLHHHKQNPLYTHFDDIIEIFKKCDVSFSLGDSLRP
GCTHDASDEAQLAELKTLGNLTRRAWEHDIQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARKRPGARDRDDELSTARYNFDWNRQFELSLD
PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDAEALTELEKFLAKEKEPSSIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 7e-122 63
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 7e-122 63
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 9e-120 57