Gene Information

Name : Cha6605_2617 (Cha6605_2617)
Accession : YP_007097189.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2703486 - 2704370 bp
Length : 885 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTAGAACTCGTCGCTCAAGATCTATCCCTGGCTTACCAAGGGAACGCGATTATTCACGATTTATCCTTAACGATTCC
TGCCGAAAAAATTACTGTATTAGTGGGGTCGAATGGCTGCGGCAAATCGACCTTACTCAAAGGGTTGGCAAGATTGCTCA
AACCGACTAGCGGCGGGGTATATCTCGATGGTAAATCGATCCTCGCCGGATCGACCAAAAGCGTCGCCCGCCAATTGGGA
TTATTACCGCAAAGTCCGATCTCCCCTGAAGGTTTAACCGTCAAAGATTTGGTGTCCCAAGGTCGTTATCCCTATCAAGA
TTGGCGGCAACAATGGTCGATCCAAGACCGTCAAATCGTCCGCGAAGCCTTGGAAATGACCGACTTAACAGCCCTGAGCG
ATCGCCCCCTCGATACCCTCTCTGGCGGTCAAAGACAGCGCGCCTGGATTGCCATGTCCCTGGCTCAAAATACCAAAATT
TTGTTACTAGACGAGCCGACCACATTTCTCGATCTCGCCCATCAAATGGAAGTTTTGGATCTGCTCTACCGACTCAATCA
GCACCAAGGACGGACGATCGTGATGGTATTGCACGATCTCGATCGAGCCTGTCGTTATGCCGATTATTTAGTTGCCATTA
AAGCCGGACGTGTATTTGCCGCAGGCACCCCAGCCGAGATCGTCACAGCAGAACTGGTCGAGGCGGTATTTAACCTCAAA
TGTCAGATCTATCCCGATCCGATCGCCGGAACGCCGATGTGTATTCCGATCGGTACCAAAACCTTCAATCCAGAAGCTAC
CGATGGCAACCATCCAGTTCGACCCAATCTGCTCGGCAGCCTCAAACCGTTGGAAGCTGAAAAGGTGTTGAGAACAGAAC
TATAG

Protein sequence : 
MLELVAQDLSLAYQGNAIIHDLSLTIPAEKITVLVGSNGCGKSTLLKGLARLLKPTSGGVYLDGKSILAGSTKSVARQLG
LLPQSPISPEGLTVKDLVSQGRYPYQDWRQQWSIQDRQIVREALEMTDLTALSDRPLDTLSGGQRQRAWIAMSLAQNTKI
LLLDEPTTFLDLAHQMEVLDLLYRLNQHQGRTIVMVLHDLDRACRYADYLVAIKAGRVFAAGTPAEIVTAELVEAVFNLK
CQIYPDPIAGTPMCIPIGTKTFNPEATDGNHPVRPNLLGSLKPLEAEKVLRTEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-63 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-58 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-58 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-55 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-58 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-58 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-58 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-58 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-51 47
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2617 YP_007097189.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 4e-55 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2617 YP_007097189.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 4e-64 50
Cha6605_2617 YP_007097189.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 3e-55 48