Gene Information

Name : Cha6605_2616 (Cha6605_2616)
Accession : YP_007097188.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2702449 - 2703492 bp
Length : 1044 bp
Strand : +
Note : PFAM: FecCD transport family

DNA sequence : 
ATGAAAAACTGGTTAGCCATTCGCCCGCCGTTACCAGAGTCACGCCCCGATCGGCAGCAATTGCCAATCGTCCCCATCTT
AGGGGGATTGAGCTTGGTAGCGATCGTCGTCAGTGTCGGGCAAGGTGAGTACCCGATCGCGATCGGCAATCTTGTCGCAA
CTCTGCTGGGAATCGATACAGGCAATCCCGATCTACCATTTGTGATTCAAACCTTGAGATTGCCCCGTACCTTAGTCGCC
TTTTTAGTCGGTGTCGCATTGGCGATTTCGGGGGCGATTTTTCAAGGCTTAACCCGCAATCCCCTTGCCGATCCGAGCAT
CATCGGCATCAATGCAGGCGCGAGTTTGGCAGCAGTTACGACGATCGTGTTATTGCCCGATGCCCCAGTTGTTGTCCTAC
CGATCGCCGCATTTTTCGGGGCATTATTGATGGCAGCCTCGATCTATAGTTTGGCAGGAACCGGGAAAAATTCACCGATG
TTATTAATTTTGCTGGGCATTGGCTTATCGGCGATCGCTAGTGCCTGCACGAGTTTAATGATTTCCTTGGGTTCTATTTA
CCAAGTCAGCCAAGCTTTAGTCTGGCTGGCTGGCAGCGTCTACGCTCGCACCTGGTCGGATTTATTCGCCTTGTTGCCGT
GGACGCTGGTTGGTACTGCCCTGGCATTGGGACTAACGCGAGAGTTAAATGTCCTCAACTTGGGCGATGAGATCGCCGCT
GGATTGGGGAGTCGCGTAAGCTGGCAACGCGCCCAGCTCGTTATCGTCGCCGTGGCGTTAGCTGGCTCGGCAGTGGCTAC
CGCTGGATCGATCGGGTTTGTCGGACTGATTGCCCCCCACATCGCCCGCCAACTCGTCGGGGGCAATTATCGCCAGATTT
TACCAGTCACCGCCCTCATCGGGGGCATTTTAGTAACGATCGCCGATACGATCGGGCGCACGATCTTTGCCCCGATCGAG
TTGCCCTGTGGTGTCGTCATCGCCGCGATCGGCGCGCCGTTTTTCCTCTATTTACTGATTCAAAATCGCTACCGCCAATG
CTAG

Protein sequence : 
MKNWLAIRPPLPESRPDRQQLPIVPILGGLSLVAIVVSVGQGEYPIAIGNLVATLLGIDTGNPDLPFVIQTLRLPRTLVA
FLVGVALAISGAIFQGLTRNPLADPSIIGINAGASLAAVTTIVLLPDAPVVVLPIAAFFGALLMAASIYSLAGTGKNSPM
LLILLGIGLSAIASACTSLMISLGSIYQVSQALVWLAGSVYARTWSDLFALLPWTLVGTALALGLTRELNVLNLGDEIAA
GLGSRVSWQRAQLVIVAVALAGSAVATAGSIGFVGLIAPHIARQLVGGNYRQILPVTALIGGILVTIADTIGRTIFAPIE
LPCGVVIAAIGAPFFLYLLIQNRYRQC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 5e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2616 YP_007097188.1 ABC-type Fe3+-siderophore transport system, permease component BAC0163 Protein 3e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2616 YP_007097188.1 ABC-type Fe3+-siderophore transport system, permease component VFG1043 Protein 3e-23 43