Gene Information

Name : Cha6605_2553 (Cha6605_2553)
Accession : YP_007097130.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : urease, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2637194 - 2638900 bp
Length : 1707 bp
Strand : -
Note : PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGGAAATTAGTCGGGAGCGTTATGCAGAGCTGTTTGGCCCCACCACAGGCGATCGGATTCGGTTAGGGGATACATCTTT
AATTGCGGAAGTTCAGAGAGATACCACTGTCTATGGTGATGAGTGCGTATTTGGTGGTGGTAAAACCCTGCGGGATGGTT
TGGGCTTGGCTTCTGGAGTCACAGCAGCAGAGGGAGCATTAGATCTTGTGATTACCAATGTGGTGTTGATCGATCCGGTG
CAGGGGATTGTCAAGACAGACATTGGCATCAAAGATGGCAAGATTGTAGGAATTGGTAAAGCAGGCAATCCTGGTGTGAT
GGATGGAGTACAGCCAAATCTAATGATTAGTGCCAATACAGATGTGCGATCGGCTGAAGGTTTGATTGCTACCCCCGGGG
GAATTGATTGTCACGTTCATTTTGATAGTGCGGGTCTCTGTGCCGAGGCACTTTCTAGCGGATTAACGACGATGATTGGG
GGTGGGTTGGGGCCAGTCACCGTGGGCATTTGTTCGGGTGGAGCCTATAATATGGGCTTAATGCTCCAAGCTTCCGAAGG
ATTTGCGATTAATTTTGGCTTTTTGGGTAAAGGGAGTTCGAGTCTCCCAGCAAGTCTCGTCGAACAAATAGAAGGCGGTG
CGATCGGACTAAAAATCCATGAAGATTGGGGCGCAATGCCTGCGCTGATTGATACCTGTCTTTCTGTTGCCGATCTGCAC
GACTTTCAAGTCCAAATTCACACTGATACGCTCAATGAGTCTGGCTATGTAGAAGATACGCTTGCAGCAATTCGTGGTCG
CACGATCCACATGTACCATACGGAAGGTGCTGGCGGTGGACACGCTCCAGACATCATCAAGGTGGCTTCCTATTCTCACT
GTCTACCTTCTTCCACTAATCCCACCAATCCCTATACAGTTAACACCTTTGATGAACATTTAGATATGGTGATGGTCTGC
CATCACCTCAATCCCAGAGTTCCCGAAGATGTCGCCTTTGCCGAATCGCGGATTCGTGCCGAAACTATTGCGGCGGAAGA
TATTTTGCACGATCTGGGTGCCATCAGCATGATGGGATCTGATAGTCAGGGCATGGGCAGGATTGGCGAAGTAATTTGTC
GCACTTGGCAATTGGCTTCCAAAATGAAAGACCAACGTGGCGCACTTCCTGAAGATAGCGATCGCCATGATAATCAACGA
ATTTTGAGATACATCGCAAAATACACAATTAATCCTGCCAAAACCTGTGGAATTGATTCCCATGTAGGTTCGATCGAACC
CGGTAAAATCGCGGACATTGTGCTTTGGCATCCTGGTTATTTTGGAGTTAAACCAGAGCTAGTAATTAAGGGAGGCTTTA
TCGCTTGGTCGCCTATGGGTGAATCAAACGCCTCGCTGATGACTTGCGAACCAATTCTGTATCGTCCGCAATGGGGCAGC
TATGGCAGTGCCAAGCAGTCTACTTCTTTTTGCTTTGTGACTCAGACTGCTCTAGATTGCGGCTTAGCCGATAAGCTGAA
ACTTCGCAAACAACTTTTGCCAGTCAAAAACACCAGATCCCTGAGTAAAGCAGATATGTTGCATAACACCGTCTGTCCTG
AAATTGAAGTCGATCCCGACACTTTTCAGGTGCGGGTGAATGGTGAAATCGCTACCTGCGAACCTGTCTCGCGAGTGCCG
CTCGGTCGGCTGTATATCTTCAGGTAA

Protein sequence :
MEISRERYAELFGPTTGDRIRLGDTSLIAEVQRDTTVYGDECVFGGGKTLRDGLGLASGVTAAEGALDLVITNVVLIDPV
QGIVKTDIGIKDGKIVGIGKAGNPGVMDGVQPNLMISANTDVRSAEGLIATPGGIDCHVHFDSAGLCAEALSSGLTTMIG
GGLGPVTVGICSGGAYNMGLMLQASEGFAINFGFLGKGSSSLPASLVEQIEGGAIGLKIHEDWGAMPALIDTCLSVADLH
DFQVQIHTDTLNESGYVEDTLAAIRGRTIHMYHTEGAGGGHAPDIIKVASYSHCLPSSTNPTNPYTVNTFDEHLDMVMVC
HHLNPRVPEDVAFAESRIRAETIAAEDILHDLGAISMMGSDSQGMGRIGEVICRTWQLASKMKDQRGALPEDSDRHDNQR
ILRYIAKYTINPAKTCGIDSHVGSIEPGKIADIVLWHPGYFGVKPELVIKGGFIAWSPMGESNASLMTCEPILYRPQWGS
YGSAKQSTSFCFVTQTALDCGLADKLKLRKQLLPVKNTRSLSKADMLHNTVCPEIEVDPDTFQVRVNGEIATCEPVSRVP
LGRLYIFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 5e-134 57
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 5e-134 57
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-134 55
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-134 55
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-134 55
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-134 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2553 YP_007097130.1 urease, alpha subunit VFG0270 Protein 1e-138 56