Gene Information

Name : Cha6605_2468 (Cha6605_2468)
Accession : YP_007097052.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2549334 - 2550755 bp
Length : 1422 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGCAAGTTTGTGTAATTGGAACGGGCTATGTGGGGTTAGTTACCGGGGTATGTCTAGCCCAAATCGGGCATCAGGTAAT
TTGTGTCGATAATGATGCCCAGAAAGTCAAGTTGATGCAGTCGGGGCAATCGCCAATTTTTGAACCTGGTTTGGCGCAGA
TGATGGCAGCCAATATGGAGGCGGGAAGACTGGAATTTACTGCCGATCTGCGAGTTGGAGTAGAGCGAGGGGAGATATTA
TTTATCGCTGTCGGTACTCCGGCACTCCCTTCTGGTGCCAGCGACACTCGCTATGTCGAAGCGGTGGCACGCGGGATCGG
ACAGCATCTGAATGGGGGCTACAAGGTCATTGTGAATAAGTCTACAGTACCGATCGGTTCTGGGGACTGGGTACGCCGGA
TCGTCCTGGATGGGGTGGCTGAGGGCAACTCCGAGCATACTAATTTTGATGTGGTTAGCAATCCAGAATTTTTGCGAGAA
GGATCGGCAATTTATGATACTTTCAATCCCGATCGCATTGTCATTGGCAGTAGCAGCGAACGGGCGATCGATTTAATGCA
GCAGCTCTACGCGCCGATTGTGACGAGACAATTCGCTCAATATCCCGATTTACCGCCTGTGCCCGTATTAGTGACAGATT
TGACTTCTGCGGAAACGATTAAATATGCCGCTAATGCGTTTTTAGCTACCAAAATTAGCTTTATTAATGAAGTTAGCAAT
ATTTGCGATCGCGTGGGTGCCGATGTCACGTTGGTGGCGCAGGGGATTGGATTAGATACACGGATCGGGCATAAATTTCT
GCAAGCGGGGATTGGTTGGGGTGGCTCTTGTTTTCCTAAGGATGTTTCTGCGCTGGTACATACCGCAACTGACTATGGTT
ATGATGCCCAACTGCTCAAATCGACGATCGAGACAAATCGACAGCAGCGATTAATTGCCGTGGAAAAACTCCAACAAGTA
CTCAAAATTCTTAAAGGTAAAACGATCGGTTTATTAGGACTGACATTCAAGCCAGATACCGACGATCTGCGCGATGCACC
TGCCCTAGATTTAATCGATCGATTGACACATTTAGGTGCGAAGGTTAAAGCTTTCGATCCGTTAATTAGTTCGGCTCGAT
CGCATCCCGATCTAACCAAAATTACCTTAACTACTAATGCTGAAGATCTGGCAATGGGGTGTGATGCGCTGGTATTAATA
ACTGAGTGGCAAGAGTTTCAGTTATTAGATTATACTCATTTAGCTAGTCTAATGGAGCGACCGACGATCGTCGATGGACG
CAACTATTTAGATGCTGTAGCCTTAACCAATGCTGGCTTTGATTATATCGGCATCGGTCGTCCGAGGGTCGATCTAGTAG
AGTCGGTTCTGCCAAATCGTCTCACCCAAATCGACGATCTGCCGTTGAAATCTGCTGCATAA

Protein sequence :
MQVCVIGTGYVGLVTGVCLAQIGHQVICVDNDAQKVKLMQSGQSPIFEPGLAQMMAANMEAGRLEFTADLRVGVERGEIL
FIAVGTPALPSGASDTRYVEAVARGIGQHLNGGYKVIVNKSTVPIGSGDWVRRIVLDGVAEGNSEHTNFDVVSNPEFLRE
GSAIYDTFNPDRIVIGSSSERAIDLMQQLYAPIVTRQFAQYPDLPPVPVLVTDLTSAETIKYAANAFLATKISFINEVSN
ICDRVGADVTLVAQGIGLDTRIGHKFLQAGIGWGGSCFPKDVSALVHTATDYGYDAQLLKSTIETNRQQRLIAVEKLQQV
LKILKGKTIGLLGLTFKPDTDDLRDAPALDLIDRLTHLGAKVKAFDPLISSARSHPDLTKITLTTNAEDLAMGCDALVLI
TEWQEFQLLDYTHLASLMERPTIVDGRNYLDAVALTNAGFDYIGIGRPRVDLVESVLPNRLTQIDDLPLKSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 3e-55 41
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 3e-55 41
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 3e-55 41