Gene Information

Name : Cha6605_2313 (Cha6605_2313)
Accession : YP_007096916.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ATPase component of Mn/Zn ABC-type transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2385216 - 2385962 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: anchored repeat-type ABC transporter, ATP-binding subunit

DNA sequence : 
ATGCTAGAGATTCAGCAATTAGCTGTCAATTACCGTGGCGTGCGCGCTTTAGAGCAAATTGACTTCCGGATCGAACCAGG
CGAACTGGTGGGGCTAATTGGGCCGAATGGAGCGGGTAAGAGTACACTCCTCAAAGCAATGTTGGGACTGATTCCGACCG
CTAGGGGTACGATAAAATATTGTACTTGTCCCTTGTGTCAGAATTTGGAACGGGTGGCCTATGTGCCCCAAAGATCTCAG
GTGGACTGGGATTATCCAATTACCGCCCAGAATGTGGTGATGATGGCCCGCACCCGTCAGCTAGGCTGGCTGCGGCGTCC
GGGTGCGGCAGCTAAGGCGATCGTCAATGGGGCACTCGATCGAGTCGGGATGCTAGATTTCAAAGATCGGCGGATTGGGG
AGCTGTCTGGCGGGCAACAACAGCGTGTATTTCTAGCTCGCGCCCTCGCTCAACAAGCAGATTTATTCTTATTTGACGAG
CCATTTACTGGCATCGATAAAAAAACCGAAGCCGTGATGCTGGAAGTTTTTGCCGAACTCCGAACTGCGGGTAAAATTTT
GCTAGTTAGTACCCATGAATGGGGAAAATCATTAAGTCAACTCGATCGAATTTTACTGCTCAATCAAAGTCTGATTGCCG
ATGGTTCGCCCGCACAGGTAATGACTCCAGCTAATCTGCAACAAGCTTATGGTGTCTCATTTCATCAGCGTGGCAGTCGC
GATCCTGGCGCAGATTTATTCTGTTAA

Protein sequence : 
MLEIQQLAVNYRGVRALEQIDFRIEPGELVGLIGPNGAGKSTLLKAMLGLIPTARGTIKYCTCPLCQNLERVAYVPQRSQ
VDWDYPITAQNVVMMARTRQLGWLRRPGAAAKAIVNGALDRVGMLDFKDRRIGELSGGQQQRVFLARALAQQADLFLFDE
PFTGIDKKTEAVMLEVFAELRTAGKILLVSTHEWGKSLSQLDRILLLNQSLIADGSPAQVMTPANLQQAYGVSFHQRGSR
DPGADLFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-47 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-47 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-47 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-47 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-47 44
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-39 43
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2313 YP_007096916.1 ATPase component of Mn/Zn ABC-type transporter BAC0400 Protein 6e-48 49
Cha6605_2313 YP_007096916.1 ATPase component of Mn/Zn ABC-type transporter BAC0350 Protein 6e-48 44
Cha6605_2313 YP_007096916.1 ATPase component of Mn/Zn ABC-type transporter BAC0440 Protein 2e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2313 YP_007096916.1 ATPase component of Mn/Zn ABC-type transporter VFG0526 Protein 6e-48 44