Gene Information

Name : Cha6605_2288 (Cha6605_2288)
Accession : YP_007096893.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2359186 - 2360211 bp
Length : 1026 bp
Strand : -
Note : PFAM: FecCD transport family

DNA sequence : 
ATGTCAAAGCTAATTCACGTACCACCGCGATCGAGTCGTCAAAAGCTCGATGCTAAACCCGCAATTACCCTCGGATTATC
GATAGTACTAATTATCGGAATGCTATTCTCACTCTGTCAAGGCTCTGTACCTTTGACCCTACATGAAGTCTGGCAAGCTT
TAGGCGATCGAGGTTTAGCTCAGAATCAGACAATTATCTGGGATTTGCGATTACCGCGTATTTTAGCAGCAACGATCGTC
GGAGCCGCTTTAGGGATGTCGGGCGGTTTATTACAAGGGATGCTCCGCAATAGTTTAGCCGATCCGTTCGTGCTGGGGAT
TTCGGCAGGTGCGGGGTTAGTGGCGATCGCCTGTATTACCTTCTCGGTTGCCTCGGTGTATCTACCTTTAGGCGCATGGT
TGGGGGCGATGGGGACAGCCGCGATCGTTTATATTTTAGGCTATCGGGCGGGGACGATTACCGCCGAGCGGTTGGTACTC
GCGGGGATTGCCGTTAGTTCGCTATTTGGGGCGATGCAGACGATGATGCTGCTCTTAAACGATGAAAGTCGGCTCCAGTC
GGCGTTAAATTGGTTGGTAGGCAGTCTGAATGGGCGCGGTTGGTGGATCGTTCAAGTGGCGAGTCCTTACGTGGTGGTAG
GCTTATTAGCGGGGTGTTTATTAGGTCGATCGATTAATCTCCTCAGTCTGGGGGATGAGTTGGCGATGAGTTTGGGTGTA
TCTTTGGTACGCACTCGACTCGCGATCGGACTGGTAGCTAGTTTACTCGCGGGGAGCGCGGTAAGTGTGGCGGGTTTGAT
TGGGTTTATCGGGTTAATTGTTCCCCACGGGATTCGGATGTTGGTTGGTAACGATTATCGCTGGTTATTACCACTATCGG
CGATCGGTGGGGCGTTGGTACTGACGTTGGCAGATCTGTTGGCGCGGATGGGATCGGTTGAGTTGCCTGTCGGCGTGGTG
ACGGCTCTATGCGGTTCGCCAGTATTTATTTGGTTATTATATCAACGTCAAGCTAGTCGGCTTTGA

Protein sequence : 
MSKLIHVPPRSSRQKLDAKPAITLGLSIVLIIGMLFSLCQGSVPLTLHEVWQALGDRGLAQNQTIIWDLRLPRILAATIV
GAALGMSGGLLQGMLRNSLADPFVLGISAGAGLVAIACITFSVASVYLPLGAWLGAMGTAAIVYILGYRAGTITAERLVL
AGIAVSSLFGAMQTMMLLLNDESRLQSALNWLVGSLNGRGWWIVQVASPYVVVGLLAGCLLGRSINLLSLGDELAMSLGV
SLVRTRLAIGLVASLLAGSAVSVAGLIGFIGLIVPHGIRMLVGNDYRWLLPLSAIGGALVLTLADLLARMGSVELPVGVV
TALCGSPVFIWLLYQRQASRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 3e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2288 YP_007096893.1 ABC-type Fe3+-siderophore transport system, permease component VFG1043 Protein 2e-19 42