Gene Information

Name : Cha6605_2287 (Cha6605_2287)
Accession : YP_007096892.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2358289 - 2359077 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAATCAATCTCTATTAATTGCCGAAAATTTGACTGGTGGGTATCAAACAAAATCGATTATTCATCAATTAAATTTGCA
ACTCGATCGCGGTGAATGGTTGAGTTTATTGGGTGGTAATGGATCTGGTAAATCTACCCTACTCAAACTCCTCAGTCGTT
TACTCTCACCCCAACAAGGGATTGTCTGGCTCGATGGTAAGGCAATTCATACCGAAGCCCCGAATATTGTCGCCCAGAAG
ATGGCTCTATTGCCCCAGCAACAAACGGTACCGAGTGGCTTAACCGTCAGGCAATTAGTTAGTTTGGGGCGAACTCCGCA
TCAACCTTGGTATCAGTGGGAATTGAGTGGAGTAGATCGAGCGCAAGTCGATCGAGCCATGATATTAACACAGGTAGTGG
AGTTTTCGGATCGATCGGTTGAAGATCTCTCTGGTGGCGAACGTCAACGGGCATTTCTGGCTTTAGCTCTGGCTCAAAAC
CCCAAAGTGTTATTACTCGACGAACCCACTACTTATTTAGATCTGCGCTATCAGTTAGAATTGTTGACGCTCCTCAAAGA
CTTGCAACAGCAACAAGAATTAACGATCGTTACCGTCCTCCACGAACTGAACCTCGCAATTCGATATAGCGACAGGTTGG
CGATGCTTAAAGATGGCTCTCTCATCGCCGTGGGCACTCCTGCAATGGTAATTACCCCCGAAACGATCGCGGAGGTATTT
GGGGTAGATGTGGCGATTATCGATACTCCCGTAGGTTTGCAGATTTGTCCGTTAGCCGGAATTCAGTAG

Protein sequence : 
MNQSLLIAENLTGGYQTKSIIHQLNLQLDRGEWLSLLGGNGSGKSTLLKLLSRLLSPQQGIVWLDGKAIHTEAPNIVAQK
MALLPQQQTVPSGLTVRQLVSLGRTPHQPWYQWELSGVDRAQVDRAMILTQVVEFSDRSVEDLSGGERQRAFLALALAQN
PKVLLLDEPTTYLDLRYQLELLTLLKDLQQQQELTIVTVLHELNLAIRYSDRLAMLKDGSLIAVGTPAMVITPETIAEVF
GVDVAIIDTPVGLQICPLAGIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-29 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-30 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-26 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2287 YP_007096892.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 2e-29 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_2287 YP_007096892.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 2e-29 45
Cha6605_2287 YP_007096892.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 8e-29 44