Gene Information

Name : Cha6605_1890 (Cha6605_1890)
Accession : YP_007096527.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1956567 - 1958492 bp
Length : 1926 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGTCTTTCCCTGCTGTGTCTAGCTCCCGTTGGCAAACACTATTAAAAGAACACCCAGATGCGATCGCGGCGGGAGTTTG
TGCCTTGCTGGTGTTACTTGGTTGGTTCACTCTCGATCGTGGGTGGCTGGGAGTGAGTTTGCTGATTCTGACCGCTGCTT
ATGTCATTGGTGGCTACGAAAGCACCCGTGAAGGGCTGACTACCCTATGGCGGGAGCAAGAACTTGATGTAGACCTATTG
ATGATTGTGGCAGCATTAGGAGCCGCCATTTTAGGGCTGTGGCGCAAAGAGTACTACTTTATTGTCGATGGGGCGATGTT
AATTCTGATTTTTGCCATCAGCGGCGTATTGGAGGGCTACGCGATGAGTCGTACCGAGCGGAGTATCCAGGGGTTGATGA
GTCTGACTTCCGATACCGCCCGCAAGCTTGTCGATGGGCAAGAGCAAATGGTAGCTGTGGCTGAGTTACAGATCGGCGAT
CGCGTTCTGGTGAAGCCAGGAGAGTTGGTACCGACGGATGGGATTGTCACGGAGGGGTTTAGCGCGATCGATCAAGCTCC
GATTACGGGCGAATCGATGCCTGTTGAAAAAACCGTCGGCGATGAGGTATTTGCAGGGACGATTAATGGTACTGGCGCGT
TGAAACTCCAGATTCACCAACCGCCAGAGAGTAGTCTGATTCAGCGGGTAATTCGCTTGGTAGAGCAGGCACAGACTGAA
ACGCCACCTTCTCAACAATTCATCGAACGGTTCGAGCGCGGCTATGCCAAAGCGATCGTCCTAATTGGCATTCTGCTAGG
TACTTTACCACCATTTCTGCTCGGTTGGACTTGGGAAAATACGGTCTATCGCGCCCTAATTTTTTTGGTAGTGGCTTCGC
CCTGTGCTTTGATGGCAGCGACGATGCCAGCACTGTTATCGGGTATTGCTAACGGGGCGCGACATGGGATTTTATTTAAG
AATGCCGCACAGTTAGAAGCGATCGGACAAATTAAAGCGATCGCTTTTGATAAGACGGGAACCCTGACGACGGGCAAACC
TCAAGTCGTTCGAGTGATGGCGGTCGATCGATCGACAGACAAATTACTCCAAGTAGCGGCGGCTTTAGAAAGTTTGTCCG
AGCATCCCATTGGTGCTGCGATCGTCCATGCGGCTCAAAAACAGGGTTGGGAATGGACTGAAGCGATTAATGTTCAGTCT
GAGCCTGGGCGGGGCATTATTGGCGAAGTTGAGGGGCAAATAGCTATAGTCGGTAAAGCCGCATTTGCTCAAGTGCAAGC
AGCACCTTGTCCAGATGCTTTGACTGAACAGAGCCAAAAGTGGGAACAGGAGGGAAAAACTGTGGTTTGGGTTGTTTATG
CCGATCGGATTCTGGGAATTATCGCAGTTGCCGATACCGTCAGACCCGCAGCAGCTCGATCGATCGTTCATTTAAAAAAG
TTGGGGATCGAGCAAATTGTGATGTTAACGGGAGATAACCAGCGGACAGCCGACAGTATTGCCTGGGAAATTGGGATCGA
TAAAGTCTATGCCCAACTACTACCTGAAGATAAACTTGGGGTAATTCGTCAGCTCCAGCAACAATACCCCTCGGTGGCGA
TGGTTGGCGATGGTATCAATGATGCTCCCGCTTTAGCTCAAGCATCTGTAGGAATTGCGATGGGAACGGCGGGGAGTGAT
GTGGCACTAGAAACAGCAGATGTGGTATTAATGGCCGATCGTTTGGAAAAATTAGAGTATGCCATCCGCCTCGGTCGTCG
CTCTGGGCGGATTGTCAAACAAAACATTGTTTTTGCCCTTAGCTTCATTGCGATCTTGCTGATTGCCAATTTTACTGGGA
ATATGACCCTACCCTTGGGCGTTCTCGGTCATGAAGGATCTACCGTACTGGTGATTTTAAGTGGTCTACGGTTGCTCAAA
GATTAA

Protein sequence :
MSFPAVSSSRWQTLLKEHPDAIAAGVCALLVLLGWFTLDRGWLGVSLLILTAAYVIGGYESTREGLTTLWREQELDVDLL
MIVAALGAAILGLWRKEYYFIVDGAMLILIFAISGVLEGYAMSRTERSIQGLMSLTSDTARKLVDGQEQMVAVAELQIGD
RVLVKPGELVPTDGIVTEGFSAIDQAPITGESMPVEKTVGDEVFAGTINGTGALKLQIHQPPESSLIQRVIRLVEQAQTE
TPPSQQFIERFERGYAKAIVLIGILLGTLPPFLLGWTWENTVYRALIFLVVASPCALMAATMPALLSGIANGARHGILFK
NAAQLEAIGQIKAIAFDKTGTLTTGKPQVVRVMAVDRSTDKLLQVAAALESLSEHPIGAAIVHAAQKQGWEWTEAINVQS
EPGRGIIGEVEGQIAIVGKAAFAQVQAAPCPDALTEQSQKWEQEGKTVVWVVYADRILGIIAVADTVRPAAARSIVHLKK
LGIEQIVMLTGDNQRTADSIAWEIGIDKVYAQLLPEDKLGVIRQLQQQYPSVAMVGDGINDAPALAQASVGIAMGTAGSD
VALETADVVLMADRLEKLEYAIRLGRRSGRIVKQNIVFALSFIAILLIANFTGNMTLPLGVLGHEGSTVLVILSGLRLLK
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 9e-103 41
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 9e-103 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_1890 YP_007096527.1 heavy metal translocating P-type ATPase BAC0092 Protein 0.0 74
Cha6605_1890 YP_007096527.1 heavy metal translocating P-type ATPase BAC0099 Protein 3e-98 44
Cha6605_1890 YP_007096527.1 heavy metal translocating P-type ATPase BAC0124 Protein 3e-90 42
Cha6605_1890 YP_007096527.1 heavy metal translocating P-type ATPase BAC0461 Protein 3e-77 41
Cha6605_1890 YP_007096527.1 heavy metal translocating P-type ATPase BAC0101 Protein 6e-75 41