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Name : Cha6605_1826 (Cha6605_1826) Accession : YP_007096472.1 Strain : Chamaesiphon minutus PCC 6605 Genome accession: NC_019697 Putative virulence/resistance : Virulence Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 1893778 - 1895193 bp Length : 1416 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain DNA sequence : ATGATAAGGGAGAAACACAAGTGGAAGCCCCATAAGTGTGAGAGTACCGATGCAGGTGGCAGGGGCGGAGCGACCCGTAG TAGCGAAGAACATCCTGTAATGGGATGGGAGCGAAGGGGAAGCATTGTCCAGCTTGGAAAAATCGAACAACCGGAAATCG GGAGGATTCAAATGGAACAAGCAAAGCCGTTGAGTATCACCAAACGCCAAGTTTGGGAAGCATATAAACGGGTCAAAGCC AACAAGGGAGCGGCTGGAGTAGATGGACAGACGATCGAAAAGTTTGAAGAGAATCTGTCGGATAACCTCTACAAATTATG GAATCGGATGACATCTGGCAGCTACTTTCCATCCCCGGTTCTACGGGTAGAAATACCAAAAGGAGACGGCAGGATGAGGC CATTGGGAATTCCGACTGTGTCAGATCGGGTAGCCCAGATGGTAGCCAAAGATTTATTGGAACCGGAATTGGAAAAACAC TTCCATCCAGATTCATATGGCTATCGACCGGGAAAATCGGCATTAGATGCGGTGGGAATGGCGCGAAAACGTTGCTGGAA AAGCAACTGGGTGCTAGAGCTAGACATCAAAGGCTTTTTCGATAACATCGACCATGAGCTGATGATGCGGGCGGTGCGCG TACATACGGAAGAGAAATGGGTAATTCTGTACATCGAACGCTGGCTAAAGTCACCGATTCAGATGCCAGATGGCACCAAA CAACTTCCAGACAAAGGGCTACCGCAAGGCGGAGTTGCCAGTCCATTGCTGGCGAATCTGTTTTTGCATTACGCATTCGA CAAGTGGATGGAGCGGAAAAATCCGGACATTCAATTTGAGCGGTATGCGGATGATGCGGTGTGTCACTGTAAGAGCGAAG CCCAGGCGCAAAAGCTGAAGCAAGACCTAAATGAGCGCATGAAGGAAGTTGGGTTGGAACTTCATCCAGAAAAGACGAAT ATAGTCTATTGCAAGGATGATGACCGACGGGAAGAATATCCCCTCACCAGCTTTGACTTTTTGGGGTATACATTTAGACC TCGCAGGTCAAAGAATCGATGGGGAAAACACTTCATCAACTTTACTCCAGCGATTAGTAATCAGGCAGCTAAGGCGATTC GGAAGACATCGCGCCAGTGGGACTGGCAATTAAGGAGCGATAAAAAGTTAGAAGACCTGGCCAGGATGTTTAATCCAGTC ATTAGAGGTTGGATTAACTACTATGGTCGCTACTACAAGTCAGCCCTATACCCGACCCTAAAATGCTTGGAACGTCGCCT AGTCATGTGGGCGACGCGGAAATACAAACGTCTACGGAATCATCGGCGGCAGGCAGCACAATGGTTGAGACGCATAGCGC GAAAACAGCCGAACCTGTTTGCTCACTGGGGATTGCTGTATATGGCGGCTGGATAA Protein sequence : MIREKHKWKPHKCESTDAGGRGGATRSSEEHPVMGWERRGSIVQLGKIEQPEIGRIQMEQAKPLSITKRQVWEAYKRVKA NKGAAGVDGQTIEKFEENLSDNLYKLWNRMTSGSYFPSPVLRVEIPKGDGRMRPLGIPTVSDRVAQMVAKDLLEPELEKH FHPDSYGYRPGKSALDAVGMARKRCWKSNWVLELDIKGFFDNIDHELMMRAVRVHTEEKWVILYIERWLKSPIQMPDGTK QLPDKGLPQGGVASPLLANLFLHYAFDKWMERKNPDIQFERYADDAVCHCKSEAQAQKLKQDLNERMKEVGLELHPEKTN IVYCKDDDRREEYPLTSFDFLGYTFRPRRSKNRWGKHFINFTPAISNQAAKAIRKTSRQWDWQLRSDKKLEDLARMFNPV IRGWINYYGRYYKSALYPTLKCLERRLVMWATRKYKRLRNHRRQAAQWLRRIARKQPNLFAHWGLLYMAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 3e-116 | 53 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 4e-86 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cha6605_1826 | YP_007096472.1 | Retron-type reverse transcriptase | VFG1512 | Protein | 2e-86 | 47 |
