Gene Information

Name : Cha6605_0108 (Cha6605_0108)
Accession : YP_007094942.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 115149 - 115811 bp
Length : 663 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :

ATGATTGAGATGGAAAATATTATTAAAACCTATCAGCTAGGTGAAGTCCAAGTTCCCGTACTCAAAGGAATTAATTTGCA
CGTTGAGGAGGGAGATTATATCTCAATAATGGGAGCATCTGGCTCGGGCAAATCAACATTAATGAATATTATTGGGTGTC
TCGATCGACCGACTGATGGCGCGTACTATTTAGACAATCTAGATCTCACGAAATTAGCAAAAGACGATCTAGCCTACATC
CGCAATCAATATATCGGTTTTGTCTTTCAACAATTTAATCTATTAACACGTTCTACCGCGTTAGAAAATGTGATGTTACC
GATGATTTATGGCGGCATTCCCAAATCAGAGCGACGAGAGCGAGCAGAAGCAGCTTTGATTAATGTCGGCTTGAGAGATC
GACTAACTAATCGTCCCAGTCAATTGTCGGGCGGACAACAACAACGCGTCGCGATCGCACGAGCTTTAGTCAACCAACCC
GCACTCCTACTCGCTGACGAACCCACTGGCGCACTCGATACCCAAACATCACAAGAAGTGATGAAGTTATTTGACAATCT
CAATGCCCAAGGCATCACGATCGTCATTATTACTCACGAACCAGAGATTGCCGCCCAAACTCATCGCCAAATTGTCATGC
AAGATGGTCTAATTGTGGGCTGA

Protein sequence :

MIEMENIIKTYQLGEVQVPVLKGINLHVEEGDYISIMGASGSGKSTLMNIIGCLDRPTDGAYYLDNLDLTKLAKDDLAYI
RNQYIGFVFQQFNLLTRSTALENVMLPMIYGGIPKSERRERAEAALINVGLRDRLTNRPSQLSGGQQQRVAIARALVNQP
ALLLADEPTGALDTQTSQEVMKLFDNLNAQGITIVIITHEPEIAAQTHRQIVMQDGLIVG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	44
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	44
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-34	44
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-31	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Cha6605_0108	YP_007094942.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	1e-53	57
Cha6605_0108	YP_007094942.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	4e-47	49
Cha6605_0108	YP_007094942.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-33	43
Cha6605_0108	YP_007094942.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-29	43
Cha6605_0108	YP_007094942.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-31	41