Gene Information

Name : Chro_0096 (Chro_0096)
Accession : YP_007089522.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.12
Position : 116135 - 117184 bp
Length : 1050 bp
Strand : -
Note : PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR008089; KEGG: gvi:glr1068 nucleotide sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleotide sugar epimerase

DNA sequence :
ATGCACGTATTAGTGACTGGAGTTGCCGGATTTATCGGTTATCATTTAGCACAACGGTTGCTTCAAGAGGGGATAGGAGT
CTATGGCATAGACAACCTCAACAACTACTACGATGTCAAACTCAAGCACGACCGCTTAGCGCAGCTTCAGCCACATCCGG
GGTTTGCATTTCAAAAATTGGACTTAGCAGAACGCGATCGCCTTTTAGAATTGTTTCAATACAATAAATTCGATTATGTC
GTCAATTTAGCAGCCCAAGCAGGGGTTCGTTATTCTCTACAAAATCCCTTTGCCTACTCTGATAGTAATCTTTCCGGGTT
TGTTAACCTGCTGGAAGGCTGTCGTCACAGTCAGGTCAAACACTTAGTCTTTGCGTCTTCCAGTTCTGTTTACGGTGCAA
ATACCAAAATACCTTTCTCAGTTAGCGATCGCGTCGATCGCCCCGTGTCTCTCTACGCTGCTACCAAAAAAGCCAACGAA
CTGATCGCCCATGTCTACAGCCATCTCTACAATTTACCGACTACCGGATTGCGTTTTTTTACCGTTTACGGTCCTTGGGG
AAGACCGGATATGGCTTATTTTAAATTTGTCCAGGCGATTGAAGCAGGCAAGCCAATTGAAGTCTACAACTATGGCAAGA
TGAAACGCGACTTCACCTATATTGATGATGTTGTAGAAGGCGTAATGCGAGTTATGCTGCGTCCACCTCAAATGTGTTCT
CAACCAAACGGCAATAGTGCAATACCTGAAAACCAAGCTCCATATAAAATTTACAACATTGGTAATAATAGTCCGGTAGA
ACTGAATGAGTTTATTCAGACAATTGAGACCGCTTTGGGAAAAACAGCTCGCACGCAAATGTTACCGATGCAACCCGGTG
ACGTTCCTTGTACTTACGCCGATGTAGACGATTTAATTCACGATGTAGGATTCAAACCTACTACACCTTTATCAGAAGGG
ATTCAACGCTTTGTTGACTGGTATAAACTTTACTACAAAGAGCAGGAAGCCGGGAGCAGAGAGCAGGGAGCCGGGAGCAG
GGAACAGTGA

Protein sequence :
MHVLVTGVAGFIGYHLAQRLLQEGIGVYGIDNLNNYYDVKLKHDRLAQLQPHPGFAFQKLDLAERDRLLELFQYNKFDYV
VNLAAQAGVRYSLQNPFAYSDSNLSGFVNLLEGCRHSQVKHLVFASSSSVYGANTKIPFSVSDRVDRPVSLYAATKKANE
LIAHVYSHLYNLPTTGLRFFTVYGPWGRPDMAYFKFVQAIEAGKPIEVYNYGKMKRDFTYIDDVVEGVMRVMLRPPQMCS
QPNGNSAIPENQAPYKIYNIGNNSPVELNEFIQTIETALGKTARTQMLPMQPGDVPCTYADVDDLIHDVGFKPTTPLSEG
IQRFVDWYKLYYKEQEAGSREQGAGSREQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-89 58