Gene Information

Name : Chro_5501 (Chro_5501)
Accession : YP_007094730.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 6193202 - 6194920 bp
Length : 1719 bp
Strand : -
Note : PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: urease, alpha subunit; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR017951:IPR017950:IPR005848:IPR017952:IPR 011612:IPR006680; KEGG: npu:Npun_F0825 urea

DNA sequence :
ATGAGCTATCGCATGGATCGCCGTGCCTACGCCGAAACCTTCGGTCCCACAACAGGCGATCGCATCCGTCTCGCCGATAC
AGAATTATTTATCGAAGTCGAACGAGACTTTACCACCTACGGTGATGAAGTCAAGTTTGGTGGTGGTAAAGTCATCCGCG
ATGGGATGGGACAATCTCCCATTGCTAATGCTGATGGTGCTGTCGATTTAGTCATTACCAACGCTTTAATCCTCGATTGG
TGGGGGATTGTCAAAGCCGATATCGGAATTAAAGACGGTAAGATTTACAAAATTGGCAAAGCTGGCAATCCTTACATTCA
AGACAACGTAGATATTATCATCGGTCCTGGTACGGAAGTCTTAGCAGGAGAAGGCGCAATCGTCACGGCTGGTGGGATCG
ACAGTCACATTCACTTTATCTGTCCCCAGCAAATTGAAACGGCGATCGCCTCTGGTGTGACAACTATGATTGGTGGAGGT
ACGGGACCCACTACAGGTACGAATGCCACAACCTGTACCCCTGGACCCTGGAACATTTACCGGATGTTGCAAGCCGCCGA
TGCCTTTCCCGTCAATTTAGGTTTTCTCGGTAAGGGTAACAGCAGTCAACCCCAAGGCTTAGTCGAACAGATTGCAGCTG
GGGCAATGGGTTTGAAATTGCACGAAGATTGGGGAACGACTCCCGCCGCGATCGATACTTGTTTGGATGTCGCCGACCGA
CATGATGTCCAAGTCGCGATTCACACCGATACCCTCAACGAAGCTGGGTTTGTTGAAACTACCATCGGTGCTTTTAAAGG
ACGGGCGATTCATACATACCATACAGAAGGGGCTGGCGGCGGTCACGCCCCAGATATTATTAAAGTTTGCGGTGAAGCCA
ACGTTTTACCATCTTCTACCAATCCTACGCGCCCTTATACGCTCAATACCCTGGATGAACACTTAGATATGTTGATGGTG
TGCCATCACCTCGATCCAAGTATTGCCGAAGATGTCGCCTTTGCCGAGTCGCGCATTCGTCGAGAAACGATCGCCGCAGA
AGATATTTTGCACGATTTAGGGGCATTCAGCATGATTTCCTCCGACTCTCAAGCGATGGGAAGAGTAGGGGAAGTGATTA
TCCGTACTTGGCAGACGGCACATAAAATGAAAGTGCAAAGGGGGCATTTATCTTCTCCCGATGGGGGATCTATAGAAAAT
GACAATTTCCGCGCCAAAAGGTACGTTGCCAAGTACACGATCAACCCCGCTATTACCCACGGTATTGCTAATTATGTCGG
TTCTGTGGAAGTGGGGAAACTTGCCGATTTGTGTCTCTGGCGACCGGCATTTTTTGGCGTGAAACCGGAAATTGTGCTGA
AAGGCGGATTAATTGCTTGGTCGCAAATGGGTGATGCTAACGCTAGTATTCCCACTCCCCAACCAGTTCACATGCGTCCC
ATGTTTGCTAGTTTTGGCGGTGCGATCGCGGCAACATCCTTGACTTTTGTTTCTCAAATTGCCCTAGAACAAGAAATTCC
TTCTCGGTTAGGTTTACAAAAACCTGCTGTGGCTGTCTCACAAACCCGTCAAATCGGTAAGCAGGATTTAAAATTAAACG
ATGCCCTACCTCGCATCGAAGTCGATCCTGAAACCTACGAAGTTAGGGCAGATGGAGAGCTTCTCACTTGCGAACCAGCT
ACAATCTTACCAATGGCACAAAGATATTTTTTGTTTTAA

Protein sequence :
MSYRMDRRAYAETFGPTTGDRIRLADTELFIEVERDFTTYGDEVKFGGGKVIRDGMGQSPIANADGAVDLVITNALILDW
WGIVKADIGIKDGKIYKIGKAGNPYIQDNVDIIIGPGTEVLAGEGAIVTAGGIDSHIHFICPQQIETAIASGVTTMIGGG
TGPTTGTNATTCTPGPWNIYRMLQAADAFPVNLGFLGKGNSSQPQGLVEQIAAGAMGLKLHEDWGTTPAAIDTCLDVADR
HDVQVAIHTDTLNEAGFVETTIGAFKGRAIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNPTRPYTLNTLDEHLDMLMV
CHHLDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTAHKMKVQRGHLSSPDGGSIEN
DNFRAKRYVAKYTINPAITHGIANYVGSVEVGKLADLCLWRPAFFGVKPEIVLKGGLIAWSQMGDANASIPTPQPVHMRP
MFASFGGAIAATSLTFVSQIALEQEIPSRLGLQKPAVAVSQTRQIGKQDLKLNDALPRIEVDPETYEVRADGELLTCEPA
TILPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-167 70
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-167 70
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-161 66
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-162 66
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-162 66
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-162 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5501 YP_007094730.1 urease VFG0270 Protein 2e-150 64