Gene Information

Name : Chro_5347 (Chro_5347)
Accession : YP_007094581.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6006068 - 6006841 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: amr:AM1_1601 ABC transporter ATP-binding protein;

DNA sequence : 
ATGACAGCCTCTTTAATCAATTTCGCCACTGCAATTAAGCCTTCAATCAAGCACCGCAAAAGATCGGCGGAATCGAACTG
TGGTGCAAATATCCCAGAATCGTCAGCCATTGTCGCTAAAGGGATAGAAATGGCATTTCAGTCAGGACAACAGCAGTATC
CCGTGCTGAAGGGGATCGATCTCGAAATTCGAGCTGGTGATATTCAATTACTTATGGGACCATCCGGTTCGGGTAAGACA
ACCTTACTCTCAATTTTGGCAGGATTGCTTACGCCAACAGAAGGATGCGTTTACTTGCTTGGCAAAGAGATTACTAGAAT
GTCTCGGGAAAAGCTGGCGAAATTTAGATTACATAATATTGGTTTTATCTTCCAAGGTTTTAACTTATTTCCGGCGCTAA
CGGCAGCAGAAAATGTCGAGTTAGTGCTGAACTATAAGGGGATTAATGGTGCGATCGCCCAAAAACAAGCACGAACTTTG
CTAGAACAAGTAGGATTAGGGGCGCAGGTGAATCAAAAACCTAGCGATCTATCCGGCGGACAAAAACAGCGAGTCGCGAT
CGCCCGTGCTTTGGCTGGTAATCCCAAGTTGATTATGGCAGACGAACCCACAGCAGCTTTAGATTCTCAAAGCGGTCACA
ACGTAATTCAGTTACTTCGCAATTTGGCAAAAGAGCAAGGTTGCACTGTTTTGATGGTGACGCACGACCCCAGAATTATT
GACGTTGCCGATCGCGTCAGCTATTTAGAAGATGGGATGTTGACGCAGAAGTAG

Protein sequence : 
MTASLINFATAIKPSIKHRKRSAESNCGANIPESSAIVAKGIEMAFQSGQQQYPVLKGIDLEIRAGDIQLLMGPSGSGKT
TLLSILAGLLTPTEGCVYLLGKEITRMSREKLAKFRLHNIGFIFQGFNLFPALTAAENVELVLNYKGINGAIAQKQARTL
LEQVGLGAQVNQKPSDLSGGQKQRVAIARALAGNPKLIMADEPTAALDSQSGHNVIQLLRNLAKEQGCTVLMVTHDPRII
DVADRVSYLEDGMLTQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_5347 YP_007094581.1 ABC transporter NC_012469.1.7686878. Protein 2e-43 48
Chro_5347 YP_007094581.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 45
Chro_5347 YP_007094581.1 ABC transporter CP001581.1.gene598.p Protein 8e-33 43
Chro_5347 YP_007094581.1 ABC transporter CP001581.1.gene798.p Protein 1e-35 42