Gene Information

Name : Chro_4519 (Chro_4519)
Accession : YP_007093780.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5084621 - 5085418 bp
Length : 798 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: ana:all2584 ATP-binding protein of ferrichrome ABC transporter; PFAM: ABC transporter related; SMA

DNA sequence : 
ATGAAAGGATTGTCAACCAAAAATCTCTCTTTAGCTTACGACGGTACGCCGATTATCCATGACTTGAATTTGGCAATCCC
GACAGGACAAATTACTGCTTTAGTTGGTGCAAATGGTTGTGGTAAATCGACGTTATTAAGGGGACTGGCAAGATTACTCA
AACCTCGTGGTGGTGCGGTCTATCTCAATAGCACTTCGATTTTGCAGCTTTCTACCAAAGAAGTCGCCCAACAGTTAGGA
ATTTTACCTCAAGCTCCAGTCGCACCAGAAGGGTTAACAGTACGGGATTTAGTAGCACAAGGGCGTTATCCCTATCAAAA
CTGGTTGCAACAGTGGTCAGTACAAGATGAGAAGATCGTTCAACAGGCACTCTTGATTACAGATTTGCTAGAGCTAGCAG
AGCGATCGCTAGACACTTTATCAGGCGGACAACGACAGCGAGCTTGGATTGCAATGGCTTTGGCGCAAGACACGGAGATT
TTACTTTTGGACGAACCGACGACTTTTCTCGATTTAACCCACCAGATAGAAGTTTTAGATTTGTTGTATGAGTTAAACCA
CCAGGGACGGACAATCGTGATGGTGTTGCATGACTTAAATCAGGCGTGCCGTTATGCCGATTATTTAGTAGCTGTCAAAG
ATGGTCGAATTTTTGCCGCTGGATCGCCAAAGCTAGTGATGACTGAAGATACGATCCAAGAGGTTTTCGAGCTGGAGTGT
CGTATTGTTGCCGATCCAGTTTTGGGAACACCAATGTGCGTACCAATAGGACGTAAGGGCAAGGGAAATAAATTATAA

Protein sequence : 
MKGLSTKNLSLAYDGTPIIHDLNLAIPTGQITALVGANGCGKSTLLRGLARLLKPRGGAVYLNSTSILQLSTKEVAQQLG
ILPQAPVAPEGLTVRDLVAQGRYPYQNWLQQWSVQDEKIVQQALLITDLLELAERSLDTLSGGQRQRAWIAMALAQDTEI
LLLDEPTTFLDLTHQIEVLDLLYELNHQGRTIVMVLHDLNQACRYADYLVAVKDGRIFAAGSPKLVMTEDTIQEVFELEC
RIVADPVLGTPMCVPIGRKGKGNKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-64 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-56 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-59 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-59 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-60 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-60 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-54 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_4519 YP_007093780.1 ABC transporter BAC0164 Protein 5e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_4519 YP_007093780.1 ABC transporter VFG0925 Protein 5e-65 51
Chro_4519 YP_007093780.1 ABC transporter VFG1042 Protein 5e-56 49