Gene Information

Name : Chro_3925 (Chro_3925)
Accession : YP_007093204.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4430615 - 4431349 bp
Length : 735 bp
Strand : -
Note : PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347:IPR002198:IPR020904; KEGG: cyt:cce_5086 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPT

DNA sequence :
ATGTTAAACGTAGAAAATAAAGTCATTGCGATTACTGGAGCCAGTAGTGGCATCGGAGAAGCTACCGCCAAGTTACTTGC
CCAAAATGGTGCTTATGTTGTTCTAGGGGCACGGCGAACCGAAAAGCTGAAAAAGATTGTCAAGGAAATACACCAGCAAG
GGGGTACAGCCGAATTTAAAGCTCTCGATGTCACCAATCGCGAGGATGTGAAAGCCTTTATTGAGTTTACCAAGGATAAG
TTCGGTCGCGTCGATGTCATCTTCAACAATGCAGGTGTGATGCCCCTGTCCCCGTTGAATAGCTTGAAAGTCGAGGACTG
GGATACCACAATCGACGTGAACATTCGTGGTGTATTGAATGGCATTGCGGCTTCTTTGCCGATGATGGAGGCACAAGGCG
GCGGACAGATTATCAATACAGCGTCTATCGGCGCACATTTGGTAGTGCCTACTGCCGCAGTGTATTGCGCCACCAAATAT
GCAGTTTGGGCAATCTCCGAAGGACTGCGGCAGGAATCGAAAAATATTCGCGTCACCACCATCTCTCCTGGTGTGGTAGA
AACCCAACTCGGTGCAGAAATTACAGATAATGCAGCAAAAGACCTAATGAAGGAAATCCGTAAAACCGCACTGACTCCAG
ATGCGATCGCATCTGCCGTTTTGTATGCGGTGTCCCAGCCGGACGATGTTGATGTCAACGAAGTGATTGTCCGACTAACA
GCCAGCGCATTCTAG

Protein sequence :
MLNVENKVIAITGASSGIGEATAKLLAQNGAYVVLGARRTEKLKKIVKEIHQQGGTAEFKALDVTNREDVKAFIEFTKDK
FGRVDVIFNNAGVMPLSPLNSLKVEDWDTTIDVNIRGVLNGIAASLPMMEAQGGGQIINTASIGAHLVVPTAAVYCATKY
AVWAISEGLRQESKNIRVTTISPGVVETQLGAEITDNAAKDLMKEIRKTALTPDAIASAVLYAVSQPDDVDVNEVIVRLT
ASAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 3e-48 52
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 1e-57 50