Gene Information

Name : Chro_3637 (Chro_3637)
Accession : YP_007092954.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4071280 - 4072107 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: ana:all2584 ATP-binding protein of ferrichrome ABC transporter; PFAM: ABC transporter related; SMA

DNA sequence : 
ATGAAAGGATTGTCTACCAAAAATCTCTCTCTTGCTTACGACGGTGCGCCGATTGTGCGTGACTTAAATTTGGCAATTCC
AACTGGACAAATTACGGCGTTAGTCGGTGCAAACGGCTGTGGTAAATCAACGTTGTTAAGGGGACTGGCAAGATTGCTCA
AACCCATTGGTGGTGCAGTTTATCTCAATAGCACTTCAATTTTGCAGCTTTCCACTAAGGAGGTAGCCCAGCAGTTAGGG
ATTTTACCTCAAGGTCCAGTTGCACCAGAAGGATTAACAGTGCGAGATTTGGTAGCGCAAGGGCGTTATCCTTATCAAAA
TTGGTTGCAGCAGTGGTCGGTACAAGATGAGAAAATCGTCCAACAGGCGCTCTCGATTACAGATTTGCTAAATCTGGCAG
AGCGATCGCTCGATACTTTATCTGGCGGACAACGACAGCGAGCTTGGATTGCAATGGCGCTAGCACAAGATACGGAGATT
TTACTTTTGGACGAGCCAACGACTTTTCTCGATTTAGCCCACCAGGTAGAAGTTTTAGATTTATTGTACGAGTTGAACCA
GATCCAGGAACGGACAATTGTGATGGTATTGCACGACTTAAATCAAGCGTGTCGTTATGCCGATTATTTAGTTGCTGTCA
AAGATGGTCGAATTTTTGCGGCTGGAGCGCCACAGCAGGTCATGACTGAGGAAATGGTGCGAGAAGTGTTTGGCTTAGAG
TGTCGGATTGTGCCTGACCCAGTGGTGAAAACACCGTTGTGCGTACCGATAGGACGTAAGGGGGAAAGGAAATTACAAAC
AAAATCTTCCGACTTGCAATTTGACTAA

Protein sequence : 
MKGLSTKNLSLAYDGAPIVRDLNLAIPTGQITALVGANGCGKSTLLRGLARLLKPIGGAVYLNSTSILQLSTKEVAQQLG
ILPQGPVAPEGLTVRDLVAQGRYPYQNWLQQWSVQDEKIVQQALSITDLLNLAERSLDTLSGGQRQRAWIAMALAQDTEI
LLLDEPTTFLDLAHQVEVLDLLYELNQIQERTIVMVLHDLNQACRYADYLVAVKDGRIFAAGAPQQVMTEEMVREVFGLE
CRIVPDPVVKTPLCVPIGRKGERKLQTKSSDLQFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-65 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-56 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-61 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-61 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-62 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-62 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-61 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-61 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-55 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_3637 YP_007092954.1 ABC transporter BAC0164 Protein 2e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_3637 YP_007092954.1 ABC transporter VFG0925 Protein 4e-66 51
Chro_3637 YP_007092954.1 ABC transporter VFG1042 Protein 2e-56 49