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Name : Chro_3180 (Chro_3180) Accession : YP_007092514.1 Strain : Chroococcidiopsis thermalis PCC 7203 Genome accession: NC_019695 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3548564 - 3550270 bp Length : 1707 bp Strand : + Note : PFAM: Type II/IV secretion system protein; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: gvi:gll0921 general secretion pathway protein E; PFAM: type II secretion system prot DNA sequence : ATGCAAGCTTCCCCAAACATTACCTCCGCTTGGCAACGGCTCAAAAAGAACGAATTGAGCTGTTCTGAAGCGATCGCCCT TCTAGTAGATAATGAAGGAATTGTCAACCAAACACTACTAGATAAGGAAGTTAGTAGCAGATTTTTGCGCCACTTTCCCG ATAAAACTTCCTTGCCTCCAGCTATTCCCTTGCTATTGTGGCGTGGATGTTACTATCTTGGTTCGCCCGTATCCCTCGAC TCAGAAACGCTAGCCCAACTACAACAGCGCACGGGTAGCCAAATCGAAGTCATCCCCATTGCTGACAAAAGCTACCGTAC TTGGTTTCACTCTCAAAGCCTCAATCCCAATCGGATCAGCTCTATGCCCATAGTTAACCCAATTACGGGACAACTAGAGC AAGAAGACATCAGCGAAACTACAGAAATTTATTTAAGCAAAGCTGGCGATCAAATCGAGCGGATCAAAACGATTATCTCT GGAGCATTACGCAACCGAGCTAGCGACATCCACTTAGAGCCAATGGTAGATGGCTTGAGAGTGCGTTATCGAATTGATGG CGTGCTACGTGACATTACCACCTTACCAATAACAATGAGCCGCCGCGTCGTGATGGCGTTGAAGGTGATGTGCAACATGG ACATTGCCGAACACCGCCGCCCGCAAGATGGCAGGATTGAGGAAAAGTATGCTTCAGGCGATGAAGCAGAACTCAACATG GACATGCGCGTCAGTACCCTGCCCTGCGTCAATGGCGAAAAAGCAGTTATCCGCCTCTTGCCCCGAGAAAATCCCTTTAC TCACTTGGGCAACCTGGGCTTTGTTCCAGAAACGATGAACGCCTACAAAGCTTGGTTAGAGCAACCCCAAGGCATGATTA TTCTGACAGGTCCCACGGGAAGCGGTAAAACTAGTACACTTTATACGAGTTTGCAGAATGTTGCTAAAGAACACGTTAAC GTCGTCACGGTAGAAGATCCGGTTGAGTACGTCCTGCCAGGAATTACTCAAACTCAAGTTCACGAAGCCGCAGGAATGAC ATTTGCCGCAGGGATGCGGGCAATTTTGCGTCAAGATCCAGACATTATCATGGTGGGTGAAGTTCGCGATAGCGAAACGG CAGAAACCGCAGTCAGAGCAGCGCTAACCGGACACTTGGTATTTACCACTCTGCACACGAATGATGCACTCGGGGCAATT CCGCGTCTGAAGGATTTAGGTATAGATCCTGGTTTGTTGAGCGATGCGTTGTTGGGAGTAGTGGCTCAGCGTTTGGTACG TCGTGTTTGTCCCCATTGCAGCGAGCCTTATACCCCTACAGAAACAGATTTGAAAGTGCTGGGATTGGGACGAGACATAC GTACTGATACGTGGCGTAAAGGTCGAGGTTGCTCGATGTGCTTCAACTCTGGATTTTTGGGACGGGAAGCAGTGGTCGAG TTAATTGACGTAGACGATCGCATCCGCGATATTATCTACGAAGGTACGATGACCCAGTTACAGCGCTACCTACGAGAGAT TAACTATGCATCTTTCCGCAAGGCAGCGGTAGAGAAGGTGATGGCTGGGTTGACCACCGTACAAGAAGTCTTGCGCGTCC TACCTCGTTGTGCTTTGTACAACAACCATTTTGCTAGTGATAGCTTGGCTGAATCGGAATATGAATTAAACGGGCGCAAG CTGCCTGAATTGGGGAGAATGCAATAG Protein sequence : MQASPNITSAWQRLKKNELSCSEAIALLVDNEGIVNQTLLDKEVSSRFLRHFPDKTSLPPAIPLLLWRGCYYLGSPVSLD SETLAQLQQRTGSQIEVIPIADKSYRTWFHSQSLNPNRISSMPIVNPITGQLEQEDISETTEIYLSKAGDQIERIKTIIS GALRNRASDIHLEPMVDGLRVRYRIDGVLRDITTLPITMSRRVVMALKVMCNMDIAEHRRPQDGRIEEKYASGDEAELNM DMRVSTLPCVNGEKAVIRLLPRENPFTHLGNLGFVPETMNAYKAWLEQPQGMIILTGPTGSGKTSTLYTSLQNVAKEHVN VVTVEDPVEYVLPGITQTQVHEAAGMTFAAGMRAILRQDPDIIMVGEVRDSETAETAVRAALTGHLVFTTLHTNDALGAI PRLKDLGIDPGLLSDALLGVVAQRLVRRVCPHCSEPYTPTETDLKVLGLGRDIRTDTWRKGRGCSMCFNSGFLGREAVVE LIDVDDRIRDIIYEGTMTQLQRYLREINYASFRKAAVEKVMAGLTTVQEVLRVLPRCALYNNHFASDSLAESEYELNGRK LPELGRMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-75 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-75 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Chro_3180 | YP_007092514.1 | type II secretion system protein E | VFG2048 | Protein | 9e-77 | 45 |
| Chro_3180 | YP_007092514.1 | type II secretion system protein E | VFG0182 | Protein | 3e-78 | 42 |
| Chro_3180 | YP_007092514.1 | type II secretion system protein E | VFG2426 | Protein | 2e-59 | 41 |
