Gene Information

Name : Chro_2077 (Chro_2077)
Accession : YP_007091453.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2320039 - 2322525 bp
Length : 2487 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAGCATTTCACTGATAAAGCAATTAAAGCAGTTATGCTTGCCCAGGAAGAAGCACGTCGCCTGGGTCACAATTT
GGTAGGAACCGAGCAAATTTTATTAGGCTTGATTGGAGAAGGCACGGGAATTGCAGCAAAAGTATTAACCGAGCTGGGAG
TGACCCTTCAAGCAGCCCGCGCCGAAGTGGAAAAAATTATCGGTAGAGGAAATCGTCCAGCGATGGCTGAAATTCCCTTT
ACACCAAAAGTCAAGCGCGTATTCGAGCAAGCTTTCACAGAAGCACGCACTTTGGGGCATAATTACATCGGTCCAGAACA
CGTGTTGTTAGGTTTGCTCCAAGAGGGAGAAGGTGTCGCTGGAAAAGTCTTGCAAAACTTGGGGGTCGATCTAGACGAAG
CCCGTGGTAACACGATTCGCAAGTTGGGTGAAGTTGCAACTGTTGCTAGTGCTGGTAGACAAGGACGCAAGGGTTTTGGC
ACAGCCCCCAGCAAAACTTCGACGTTGGATGAGTTTGGGACGAATTTAACGAAGCTAGCGGCGGAAGGTAAGCTAGATCC
TGTCGTCGGTCGTGAAAAAGAAGTTCAACGAGCCGTGCAAATTTTAGGTCGGCGCACGAAGAATAACCCCGTATTGATTG
GCGAACCTGGTGTTGGTAAAACTGCGATCGCCGAAGGTTTGGCGCAGCGGATTGCTAATAATGACGTGCCTGATACTCTC
ATAGACAAGCAGCTATACAGTCTTGACATGGGTTCGTTAGTTGCCGGAACTCGCTATCGCGGTGACTTTGAAGAGCGGAT
CAAATCTGTTTTGGATGAAGTGCGATCGAATAGCAGTGTTATCCTATTTATCGACGAAATCCATACTTTAATTGGCGTAG
GTGGTGTCGAAGGCGGAATCGATGCGGCAAATATGCTCAAACCTGCCTTAGCTAGAGGCGAGTTGCAGTGCATGGGAGCT
ACTACCCTAGATGAGTACCGCAAGCACATCGAACGGGATGCAGCACTAGAAAGGCGTTTTCAGCCAGTGATGGTAGATGA
ACCTAGTGTTGTCGAGACAATCGAGATTTTGTTTGGGTTGCGCGATCGCTACGAGCAACACCACAAAGTTAAGATGTCAG
ATCTAGCTTTGGCTGCTGCTGCTCAACTGTCCGATCGCTACATTAGCGATCGCTTCTTGCCCGATAAGGCGATCGATTTG
ATCGACGAAGCAGGTTCTCGCGTCCGCTTCCGCAACTCGAAGCAGTCTCCCGAAACCCAAGCACTTAAGCAAGAATTGGT
GCAGGTAACGAAAGAGAAAGAAGCCGCAGTCTCGGCACAAGATTTTGACAATGCTGGTAAATTACGCGATCGCGAGTTGG
AAATCGAGCAACAGTTAAAGGCGATCGCTGACAATAGAAAGCAAGAAATCGAAAACGCTAGCGTTCCTGTAGTAGACGAA
GAAGACATTGCTCAAATTGTCGCTTCTTGGACGGGCGTACCAGTCAGCAAGCTGACGGAATCCGAATCAGAGTTGCTGTT
GCACTTAGAAGATACTCTGCACCAGCGTCTCATCGGACAAGAAGAAGCTGTTACAGCTGTTTCTAAAGCTATCCGCAGGG
CGCGAGTTGGATTGAAGAATCCCGACCGTCCGATCGCTAGTTTTATCTTTTCTGGTCCTACTGGTGTAGGTAAGACAGAG
TTGGCAAAATCCCTTGCTGCATACTTCTTCGGCTCTGAAGAAGCGATGATTCGCTTGGATATGTCGGAATTCATGGAACG
GCATACTGTTTCTAAGCTAATTGGTTCGCCTCCTGGCTACGTTGGCTATGACGAAGGCGGACAGCTAACGGAAGCCGTAC
GGCGCAAACCATACACCGTGTTGCTATTCGACGAGATCGAGAAAGCACACCCCGACGTGTTTAACATGCTGTTGCAAATC
ATGGATGACGGTCGTTTGACCGATGCCAAGGGACGCACGGTAGACTTTAAAAACACGCTGATTATTCTCACCTCTAATAT
TGGTTCGAGAGTCATTGAAAAAGGTGGCGGTGGGATTGGATTTGAATTAGGTGGCGATCGCGCTGACGCACAATACGATC
GCGTTCGCAACTTAGTCCAAGAAGAACTCAAGCAACATTTCCGTCCTGAGTTTCTCAACCGCCTTGATGAGATTATCGTC
TTCCGTCAACTCAACAAGAATGAAGTCAAGCAAATTGCTGACATCATGCTTCAAGAGATCTCTAACCGCTTGACCGAGCG
TTCTATTACCTTGAAAGTGACAGAGCGTTTTAAAGATAAAGTTGTCGATGAAGGCTACAATCCCAGCTACGGTGCTAGAC
CGTTACGCAGAGCAATGATGCGGCTGTTGGAAGATTCTTTAGCTGAAGCTATGTTATCCGGTCGCATTAACGATGGCGAC
ACAGCTTTAGTTGATGTTGATGCTGACGGTCAAGTCCAAGTCAGTAAAGTAGAAGCGAAAGAGTTGATGTTGTCTTCTGC
TAGCTAG

Protein sequence :
MFEHFTDKAIKAVMLAQEEARRLGHNLVGTEQILLGLIGEGTGIAAKVLTELGVTLQAARAEVEKIIGRGNRPAMAEIPF
TPKVKRVFEQAFTEARTLGHNYIGPEHVLLGLLQEGEGVAGKVLQNLGVDLDEARGNTIRKLGEVATVASAGRQGRKGFG
TAPSKTSTLDEFGTNLTKLAAEGKLDPVVGREKEVQRAVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDTL
IDKQLYSLDMGSLVAGTRYRGDFEERIKSVLDEVRSNSSVILFIDEIHTLIGVGGVEGGIDAANMLKPALARGELQCMGA
TTLDEYRKHIERDAALERRFQPVMVDEPSVVETIEILFGLRDRYEQHHKVKMSDLALAAAAQLSDRYISDRFLPDKAIDL
IDEAGSRVRFRNSKQSPETQALKQELVQVTKEKEAAVSAQDFDNAGKLRDRELEIEQQLKAIADNRKQEIENASVPVVDE
EDIAQIVASWTGVPVSKLTESESELLLHLEDTLHQRLIGQEEAVTAVSKAIRRARVGLKNPDRPIASFIFSGPTGVGKTE
LAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQI
MDDGRLTDAKGRTVDFKNTLIILTSNIGSRVIEKGGGGIGFELGGDRADAQYDRVRNLVQEELKQHFRPEFLNRLDEIIV
FRQLNKNEVKQIADIMLQEISNRLTERSITLKVTERFKDKVVDEGYNPSYGARPLRRAMMRLLEDSLAEAMLSGRINDGD
TALVDVDADGQVQVSKVEAKELMLSSAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_2077 YP_007091453.1 ATPase VFG0079 Protein 0.0 57
Chro_2077 YP_007091453.1 ATPase VFG0080 Protein 1e-148 52