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Name : Chro_1543 (Chro_1543) Accession : YP_007090936.1 Strain : Chroococcidiopsis thermalis PCC 7203 Genome accession: NC_019695 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1719080 - 1719544 bp Length : 465 bp Strand : - Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: npu:Npun_F0451 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAGCGACAACGACGGTTATAAGGTATTGAGCGACAATCGCAAAGCCCGCTTTTTGTACGATATCCTCGAAACCTATGA GGCAGGACTGCAACTCATGGGTACAGAAGTCAAGTCAATCCGTGCAGGTAAAGTCAACCTGCAAGATGGCTATGCTCTTA TTCGTAACGGAGAGGCATGGCTAATTAACGTTCATATCTCACCCTATACTAACAGCAGTCAATATTTTAATCACGACCCT CGCCGCACTCGTAAACTACTACTGCATCGGCAGGAAATTCGCAAGCTGATTGGTAAGGTAGAACAACAGGGTTTGACATT AGTGCCGCTAAAACTGTATCTCAAACGCGGCTTAGTCAAAATTAGTATTGGACTGGCTAAAGGGAAAAAACTCCATGACA AGCGGGAAGATTTAAAGCGCCGTCAAGACCAAAGAGAGATACAAAGGGCGATGAAAAACTACTAA Protein sequence : MSDNDGYKVLSDNRKARFLYDILETYEAGLQLMGTEVKSIRAGKVNLQDGYALIRNGEAWLINVHISPYTNSSQYFNHDP RRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKLYLKRGLVKISIGLAKGKKLHDKREDLKRRQDQREIQRAMKNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 5e-31 | 53 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 7e-33 | 52 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-28 | 47 |
