Gene Information

Name : Chro_1433 (Chro_1433)
Accession : YP_007090827.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1595653 - 1596405 bp
Length : 753 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ava:Ava_3369 t

DNA sequence :
ATGTTTACTCGCGAATTGACCAACAGTTCCCCCAAGGTGGAAATCGGGCACATGAGCCGCATTCTGGTGGTAGAAGACGA
AAACCTGATTCGGGAAATGCTCGTAATGGCTTTGGAGGCGGAAGGTTTTGCGATCGCTACTGCTGCTGACGGACGTACAG
CTTTGACCTTACTTCAGAGTAGCGAACCTACCTTCGGAGATTTTCCCTTCGATCTGGTGATTTTAGATCTAATGCTGCCT
CAGATCAATGGTTTAGATATCTGTCGCTTGCTCCGCCACCAAGGAAATCAAGTACCAATCTTGATTTTGAGCGCCAAAGG
CAGCGAAACCGATCGCGTCTTGGGTTTGGAAGTTGGCGCAGACGACTATCTGACAAAGCCTTTTAGTATGCGGGAGTTAG
TCGCGCGGTGTCGTGCTTTGTTACGCCGCCAGCGCATAGGCGTATTACCACAAGTCCCGATTCTACAATTTAAAGATGTC
ACCCTTTATCCGCAAGAGTGCCGCGTAACCGTCAGAGCGCAAGAAGTCAACCTTTCCCCTAAAGAATTCCGCTTGCTAGA
ACTCTTCATGACTTATCCGCGCCGCGTCTGGTCGCGAGAGCAATTGCTCGACCAAGTCTGGGGAGCAGATTTTGTTGGAG
ACAGCAAAACTGTAGACGTTCACATTCGTTGGTTGCGGGAAAAACTCGAAAAAGACCCCAGCCACCCAGAATATTTGGTA
ACGGTGCGCGGGTTTGGCTATCGATTTGGATAG

Protein sequence :
MFTRELTNSSPKVEIGHMSRILVVEDENLIREMLVMALEAEGFAIATAADGRTALTLLQSSEPTFGDFPFDLVILDLMLP
QINGLDICRLLRHQGNQVPILILSAKGSETDRVLGLEVGADDYLTKPFSMRELVARCRALLRRQRIGVLPQVPILQFKDV
TLYPQECRVTVRAQEVNLSPKEFRLLELFMTYPRRVWSREQLLDQVWGADFVGDSKTVDVHIRWLREKLEKDPSHPEYLV
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-38 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-49 46
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 5e-38 46
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-43 45
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 4e-41 45
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 5e-47 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 5e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 5e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 4e-41 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 5e-44 43
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 3e-22 43
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-37 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 6e-25 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator BAC0533 Protein 9e-25 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 1e-24 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 9e-25 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 1e-24 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 2e-29 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 1e-37 41
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-38 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-38 44
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-41 42
Chro_1433 YP_007090827.1 winged helix family two component transcriptional regulator VFG1389 Protein 3e-29 41