Gene Information

Name : Oscil6304_4773 (Oscil6304_4773)
Accession : YP_007088203.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Unknown
Product : RNAse PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 6084932 - 6085657 bp
Length : 726 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGATTTGGCAGCGTCCCGATGGCCGAGAACCGGCACAACTGCGTCCGATTCGGTTTGAGAAAGACTTTACCCGCTTTGC
GAACAGTTCCGTCCTGACCCGTTGTGGCGATACCCAGGTCCTCTGTACCGTCACCATCGAACCCGGAGTCCCCCGATTCC
TCGCCAATCAAGGCAGTGGCTGGTTAACTGCCGAATATCGAATGCTTCCCGGTGCCACCCCCCAACGCCAATCCCGAGAA
TTCATGAAACTATCGGGACGCACCCAAGAGATTCAACGCCTAATCGGGCGCAGTTTACGCGCTGCCATAGATTTAAAAGC
CCTGGGAGAACGGACAATTTTGATTGATGCCGATGTCCTCCAAGCGGATGCCGGAACCCGAACCACGTCGATTACCGGGG
GATTCGTGGCCCTAGCCTTGGCGATCGAGAAACTGTTACAAACTGGAGAGTTAAAACAGTCCCCAATTTGTCGCCAAGTC
GCCGCTGTGTCGGTGGGGTTATTTGAAGGACAACCCTATTTGGACCTCAACTACCCGGAAGATGTAGCAGCGGATATTGA
TTTTAATGTAGTAATGAGCGATGGGTTGGATATTATCGAATTACAAGGAACCGCCGAAGCAGGCAGTTTTAATCGCACCG
AACTCAATCGCATTTTAGATATGGCAGAAACGGGTATTCAGGAATTAGTCGCTGCACAAAAAGAGGCGATTTATGGGGGG
GAATAA

Protein sequence :
MIWQRPDGREPAQLRPIRFEKDFTRFANSSVLTRCGDTQVLCTVTIEPGVPRFLANQGSGWLTAEYRMLPGATPQRQSRE
FMKLSGRTQEIQRLIGRSLRAAIDLKALGERTILIDADVLQADAGTRTTSITGGFVALALAIEKLLQTGELKQSPICRQV
AAVSVGLFEGQPYLDLNYPEDVAADIDFNVVMSDGLDIIELQGTAEAGSFNRTELNRILDMAETGIQELVAAQKEAIYGG
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 9e-54 54