Gene Information

Name : Oscil6304_3649 (Oscil6304_3649)
Accession : YP_007087132.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Unknown
Product : DNA/RNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4600390 - 4602429 bp
Length : 2040 bp
Strand : +
Note : PFAM: DEAD/DEAH box helicase

DNA sequence :
ATGATTGCAATTCCCTCCGTTTCCGTTACCTACGCCCAGGATGGCACTTCTAATGGCATCAACGACTTAGGGATGCGTCC
CATGCAAGAACTCGCCTACCAGAAACGGGGGGAACAATATCTGCTGATTAAATCTCCCCCCGCCTCTGGGAAAAGTCGGG
CGCTGATGTTTATTGCTTTGGATAAGCTGACTCACCAGAAGCTCAAACAAGCGATTATTGTTGTCCCCGAGAAGGCGATC
GGAGCTAGTTTCCATAATGAACCCTTGACAAAGTTCGGCTTTTGGGCGGATTGGCACGTCGAACCCCGGTGGAACCTTTG
CAACGCCCCGGGTAACGATGGCGGTAAAGTAGAAGCGGTGAAAACATTTCTCAACAGTGAGGCGAAAGTGCTGGTTTGTA
CTCATGCCACCTTCCGTTTTGCCGTGGATAAATTTGGGGTAGAAATGTTAGACGATCGCCTGATTGCCGTGGATGAATTT
CACCATGTTTCCTCTAACCCGGACAACAAGCTGGGGGATCATATCTGCCAACTCATGACTCGCGACAAAACCCACATCGT
CGCCATGACGGGTTCTTATTTTCGGGGCGATGCGGAAGCGATCCTCCATCCGGAAGACCAAGCCAAATTTCACACCGTCA
TCTATACCTATTATGAACAACTCAACGGCTATCAATATCTGAAGCAACTCGATATCGGCTATTATTTTTACTCGGGTAAC
TACACCGATGAAATCATGCAGGTTCTCAACCCCAATGAGAAAACTATTCTGCATATTCCGAATGTTAATTCTCGCGAAAG
TACCAAGGACAAAATTCGCGAAGTCGAACATATTATTGAGGCACTGGGGGAATGGCAGGGGATTGAACCCAACACCGGAT
TTCAACAGGTCAAAACTGCCGAAGGGAAGATTCTGAAGATTGCAGACCTCGTGGATGATGACCCCAGCAAGCGGGATAAG
GTGGCCGCTGCCCTGAAAGACCCCAGCCAGAAAAATAACCGTGATTATGTGGATATTATTATCGCCCTGGGGATGGCTAA
AGAAGGCTTTGATTGGATTTGGTGCGAACACGCTTTAACCATTGGTTACCGTTCCAGTTTGACAGAAATTGTCCAGATTA
TTGGGCGTGCAACCCGCGATGCACCGGGTAAAACCCGCGCCCGGTTTACGAACCTAATTGCGGAACCCGATGCCAGCGAA
ATGATGGTGACTGAGGCGGTGAATGATACGATTAAGGCGATCGCCGCTAGTCTGCTGATGGAACAGGTTCTCGCGCCCCG
CTTCGAGTTCAAACCCAAGCGCCCGGACAATCAACCCACTCCCGGCTTTGAGTATGGGGAAAGTGGCTATGATCCGAGTC
GGTGCAATATGGGAGTTAATCCCGAAACGGGGCAAATTGAGCTAGAAATTAAGGGTTTAGCTGTACCCAAAAGCCCGGAA
GCCTCCCGGATCTGTCGCGAAGACTTAACGGAATTGGTGACCGCTTTTGTGCAAGATAAACCGAGTATTGAGCGCGGTTT
ATTTGATGAGGAATTAGTGCCCGAGGAACTGACCCAATTGCGGATGGGTAAAATTATTAAAGAGAAATTCCCCAACCTCG
ACGAAGGGGATCGAGAAGCGGTCCGCCAACACGCGATCGCCGCTCTCAATTTGGTGCAACAAGCTAAGAAAACCATGAAC
GAAGGGGACGAGATAGCTACGAAAAACACCGCCCTAATTGATGGGGTGCGCCAGTTTGCCCTATCCGTAACCGATTTAGA
TATTGATTTGATTGACCGGATCAATCCCTTTGGGGAAGCATACGCCATTCTGGCTAAGTCGATGAGCGAAGAACGACTCA
AACAGGTAGCAGAGGCGATCGCCGCCAAGCGTGTCAATCTCTCCCTAGAAGAAGCGCGAGAGTTAGCAAAACGGGCGCAG
CGGTTCAAACAGGAAAAGGGCCGCGTGCCTTCTCTGACTGCCGCAGATCCTTGGGAAAAACGCATGGCAGAAGGGATTGC
TTTCCTAATACGGAAAGTTAAAGAGGAAAAAAATGGGTAG

Protein sequence :
MIAIPSVSVTYAQDGTSNGINDLGMRPMQELAYQKRGEQYLLIKSPPASGKSRALMFIALDKLTHQKLKQAIIVVPEKAI
GASFHNEPLTKFGFWADWHVEPRWNLCNAPGNDGGKVEAVKTFLNSEAKVLVCTHATFRFAVDKFGVEMLDDRLIAVDEF
HHVSSNPDNKLGDHICQLMTRDKTHIVAMTGSYFRGDAEAILHPEDQAKFHTVIYTYYEQLNGYQYLKQLDIGYYFYSGN
YTDEIMQVLNPNEKTILHIPNVNSRESTKDKIREVEHIIEALGEWQGIEPNTGFQQVKTAEGKILKIADLVDDDPSKRDK
VAAALKDPSQKNNRDYVDIIIALGMAKEGFDWIWCEHALTIGYRSSLTEIVQIIGRATRDAPGKTRARFTNLIAEPDASE
MMVTEAVNDTIKAIAASLLMEQVLAPRFEFKPKRPDNQPTPGFEYGESGYDPSRCNMGVNPETGQIELEIKGLAVPKSPE
ASRICREDLTELVTAFVQDKPSIERGLFDEELVPEELTQLRMGKIIKEKFPNLDEGDREAVRQHAIAALNLVQQAKKTMN
EGDEIATKNTALIDGVRQFALSVTDLDIDLIDRINPFGEAYAILAKSMSEERLKQVAEAIAAKRVNLSLEEARELAKRAQ
RFKQEKGRVPSLTAADPWEKRMAEGIAFLIRKVKEEKNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0715_00996 YP_008216144.1 hypothetical protein Not tested AbaR27 Protein 6e-92 46
CDPW8_0255 YP_005141822.1 putative ATP-dependent helicase Not tested Not named Protein 2e-94 45