Gene Information

Name : Oscil6304_3555 (Oscil6304_3555)
Accession : YP_007087038.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4462723 - 4463436 bp
Length : 714 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCGAATTCTTTTAGTAGATGATGAAGTCCAACTCACCGAACCCCTAACTCGGGTTCTGACGCGGGAAGGATATCAAGT
AGAAGTCGCCTCCGATGGCGCAACCGGGGCCGAATTAGCGCGACAAGGGGGATATGACTTGCTGATTTTAGATTGGATGT
TACCCCACCAATCCGGATTAGCGATTTGTCAGGAAATTCGCCGTCAAGGGGATGTGACGCCGGTTCTATTTCTGACGGCA
AAAGATACCTTAGACGATCGCGTTCAAGGACTTGATGCTGGGGCCGATGATTATCTAGTAAAACCCTTTGAATTGCTAGA
ATTATTAGCAAGAGTGCGAGCACAACTGCGGCGATCGATCACCCAAAAAACTCCGGACCCGGAGACTCATCTCCACCGGG
ATGACCTGGAACTCGACCGCGAAAACCAGTTAGCATACCGAGGCGGGCGCACCATCGAACTTTCGGAAAAAGAAAGTACC
CTCCTGGCCTATTTTATGCGCCACAGCGGACAATTACTCACCCATAGCGAAATTTATCAACATTTGTGGCCTACCGGGGA
AAAACCCAGCAGCAACGTCCTCGCCGCCCAAATTCGCCTCCTCCGGCGCAAAATTGAAGCCCCAGGGGAGGTGCCATTAA
TTCATACGGTTTATGGCAAAGGGTATCGCTTTGGGTCCGGGGGTGAATCGTCCCCATCATCAGGCCCCGACTAG

Protein sequence :
MRILLVDDEVQLTEPLTRVLTREGYQVEVASDGATGAELARQGGYDLLILDWMLPHQSGLAICQEIRRQGDVTPVLFLTA
KDTLDDRVQGLDAGADDYLVKPFELLELLARVRAQLRRSITQKTPDPETHLHRDDLELDRENQLAYRGGRTIELSEKEST
LLAYFMRHSGQLLTHSEIYQHLWPTGEKPSSNVLAAQIRLLRRKIEAPGEVPLIHTVYGKGYRFGSGGESSPSSGPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-31 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 2e-35 45
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-36 44
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0288 Protein 1e-35 43
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 1e-36 43
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-38 42
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 1e-34 42
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 7e-34 42
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-36 45
Oscil6304_3555 YP_007087038.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 4e-32 42