|
Name : Oscil6304_3548 (Oscil6304_3548) Accession : YP_007087031.1 Strain : Oscillatoria acuminata PCC 6304 Genome accession: NC_019693 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 4454467 - 4455750 bp Length : 1284 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGTCGGAAAAAATTGCAATTATTGGACTGGGTTATGTCGGGCTACCCTTAGCCATTGCCTTAGCTAAACAGTTCCCAGA CACCGTTGGATTTGATATCAACCCGGAGAAAATTCACGCCCTCACCCAGGGAATCGACGCAACGGGAGAAGTCTGTTTAA ATAACTTAAAATCAACTTCTCTTCAATTCACCAGTGACCCCAATCATTTAAAATCATCCAATTTTTTCATTGTTGCTGTT CCCACCCCCATTGACTCCAATCATCATCCCGATTTAACCCCTTTAATCCGGGCCTCAGAACTGGTAGGGCGGGTGTTACA ACCGGGTTCGGTCGTGGTGTATGAATCTACGGTTTATCCGGGGGTGACTGAGGAAACTTGCGGAACCATTTTAGCCCAAG AATCTGGATTGCGTCCGGGTATTGATTTCAAATTAGGCTATTCTCCCGAACGCATCAATCCTGGAGATCCAGAACATAGG CTGGAAACCATTATTAAAGTGGTTGCTGGAGAAGATGCGGAGACCTTAGAACGGGTGGCGCAGGTTTATGAATCGATTAT TAAGGCGGGAATTTATCGCGCTCCTTCGATTAAGGTAGCAGAATCTGCCAAGGTGATTGAAAATATCCAGCGGGATTTGA ATATTGCCTTGATGAATGAACTGGCTTTAATTTTTGACCGCTTGAATATCTCAACTCATGAAGTATTAGCCGCTGCTGGG ACTAAGTGGAATTTTTTACCGTTTAAACCGGGACTGGTGGGCGGTCATTGTATTGGGGTTGACCCGTATTATCTAACTGC AAAAGCCAAACAAGTCGGCTATCGTCCAGAGGTCATTCTCGCCGGTCGGCGCATCAATGACAATATGGGGCGTTATCTGG GTCAGCGGTTGATTAAACTGTTGACTAATCATGAAAATATTCCGATTAAACAGGTTCGAGTCGGTATTTTAGGGATGACA TTTAAAGAGAATGTTCCCGATACTCGCAACACTCGGGTTCCCGATATTGTGGCTGAACTCGAACAGTTTGGTATCAGACC GTTAGTCCATGATCCCATTGCCAATCCGGAGGAAGTTCACCAAGTCTATGACATTTCCCTGTCGCCTTGGTCTGAGTTTT TTGCCTTGGATGCACTGATTCTAGCGGTGCCCCATCGTCAGTATTTAGAATGCTCACCGGATGAGTTGATCGAATGCCTG AATCCCGAGGGCATTTTTATGGATATTAAATCAGTATTAGGTCCGAGTCTGTTTCCTTCAAAAATAGTTTACTGGAGTTT ATAA Protein sequence : MSEKIAIIGLGYVGLPLAIALAKQFPDTVGFDINPEKIHALTQGIDATGEVCLNNLKSTSLQFTSDPNHLKSSNFFIVAV PTPIDSNHHPDLTPLIRASELVGRVLQPGSVVVYESTVYPGVTEETCGTILAQESGLRPGIDFKLGYSPERINPGDPEHR LETIIKVVAGEDAETLERVAQVYESIIKAGIYRAPSIKVAESAKVIENIQRDLNIALMNELALIFDRLNISTHEVLAAAG TKWNFLPFKPGLVGGHCIGVDPYYLTAKAKQVGYRPEVILAGRRINDNMGRYLGQRLIKLLTNHENIPIKQVRVGILGMT FKENVPDTRNTRVPDIVAELEQFGIRPLVHDPIANPEEVHQVYDISLSPWSEFFALDALILAVPHRQYLECSPDELIECL NPEGIFMDIKSVLGPSLFPSKIVYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-97 | 56 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-97 | 56 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-106 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Oscil6304_3548 | YP_007087031.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-97 | 56 |
