Gene Information

Name : Oscil6304_3241 (Oscil6304_3241)
Accession : YP_007086739.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4028512 - 4029342 bp
Length : 831 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCAGTAAACTCCCCGATTCTCGCCGCTGAAGATTTACAAGTTGGTTACAGTCACCAGACTATCCTCAAGAACCTGTC
CATCGAGATTGAACGGGGGAGAGTTACGGCATTAGTCGGACCCAATGGGTCGGGCAAATCTACCCTTTTAAAAACTTTAG
CTCGATTGTTGTCCCCGAGTAGCGGACAAGTTTATTTGAATGGGGTGGCACTCACGCGCCTTGCCACCCGAGATATCGCC
CGTCAAATGGCTATTCTGCCTCAAAATCCAGTCGCCCCTCCGGGATTAACGGTCGCTGAATTAGTGGAACAGGGCCGGTT
TCCTCATGTGGGACCTTTAGGGATGTTACGTCGCCAGGACCGGGAGGCGATCGCCGAGGCCCTGACTCTTACCGCCATGA
CCGAATTTGCCCATCGCCGTCTGGATAATCTCTCCGGAGGAGAACGACAACGGGCCTGGATTTCTCTAGCTTTAGCTCAA
GAAACGCCTTTATTATTATTAGATGAACCGACGAGCTTTTTAGATATTGGACATCAGCTAGAAGTGTTAGAAATTGTCCG
TCACCTGAATCGCGATCGGGGGATGACAATTATTTTAGTCCTCCATGACTTAAATCAAGCCGCCCGTTACAGCGATCGCA
TGGTGGTTCTCAAACGGGGACGAATTATAGCCGATGGAACTCCCCGTCGCGTCTTAACCCCGGACCTTTTAGCCGAAGCC
TTCGGAGTCCGCGCCCGAGTCACCCTGGAACCGGAAACCGGAATTCCCTTATGTTTTCCCTATGCCTATATTGGCAATGC
TCCCCTGCCTGTAGATGCTCCTCAATCTTAG

Protein sequence : 
MSVNSPILAAEDLQVGYSHQTILKNLSIEIERGRVTALVGPNGSGKSTLLKTLARLLSPSSGQVYLNGVALTRLATRDIA
RQMAILPQNPVAPPGLTVAELVEQGRFPHVGPLGMLRRQDREAIAEALTLTAMTEFAHRRLDNLSGGERQRAWISLALAQ
ETPLLLLDEPTSFLDIGHQLEVLEIVRHLNRDRGMTIILVLHDLNQAARYSDRMVVLKRGRIIADGTPRRVLTPDLLAEA
FGVRARVTLEPETGIPLCFPYAYIGNAPLPVDAPQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-51 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-49 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 46
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-50 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-54 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-54 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-54 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-46 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_3241 YP_007086739.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 6e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_3241 YP_007086739.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 6e-50 46
Oscil6304_3241 YP_007086739.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 1e-55 45