Gene Information

Name : Oscil6304_2869 (Oscil6304_2869)
Accession : YP_007086391.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3557087 - 3557974 bp
Length : 888 bp
Strand : -
Note : PFAM: ABC 3 transport family

DNA sequence : 
ATGTTAGACGGATTAATTGAACCTCTCCAATATAGTTTTATGCAACGATCGCTGATTGTTGCGATTTTAGTCGGCTTGAT
TTGTGCCGTGGTTGGCAGTTATCTCATCGTCCAGCGTTTGGCTTTATTAGGAGATGCGATCGGGCATTCCGTCCTCCCTG
GATTGGCAGTTGCCTATGGGATGGGGGCGAATATTTTTGTCGGGGCCTTTATTGCCGGGGTCCTCAGTACCGTCGTGATC
GCCTGGATTAGAACGCGATCGCCTATTAAAGAAGATGCCGCAATGGGAATAGTTTTATCTTCCTTTTTTGCCTTGGGCAT
TACTTTAATTACCGTCATTCAAAAAGACGAAAAAATTGACCTCAATCATTTTTTATTCGGCAATATTCTCGCTGTCACCC
CAGACGATGTAAAAACCACCGCAATGATTGCAGGTTTAACCCTCGCGGTGGTTTTTTTACTGTACAAAGAACTGTTGTTT
TACACCTTTGATCCCCTGGGTGCTCAAGCCGCAGGACTGCCAGTGAATCTGCTCAATTTTGGGTTAATGATTTTGATTGC
CCTAACCGTCGTCGCCAGTATGAAAGCGGTGGGGGTGGTTTTGGTTTTATCTCTACTGATTGCCCCTGGTGCCACGGCCT
ATTTATTGGTACCTCGTTTCCATCAGGTGATGATGGTCGGGGCGTTGATTGGGATTGTTTCCAGTGTCTCTGGAATGTAT
TGGAGTTTTTATCAAAATATCCCCTCCGGTCCGGCGATTGTGTTAGTGGTTTCGGGGTTTTTTCTGTTAGCCTTGCTGTT
GAGTCCGAGTCATGGGGTTCTGACTCATCCTCGGGCTAAAGGGGAAAGTTCTGCATTCTGGCAGGAAATTAAAGGCTTGT
TTCGCTAG

Protein sequence : 
MLDGLIEPLQYSFMQRSLIVAILVGLICAVVGSYLIVQRLALLGDAIGHSVLPGLAVAYGMGANIFVGAFIAGVLSTVVI
AWIRTRSPIKEDAAMGIVLSSFFALGITLITVIQKDEKIDLNHFLFGNILAVTPDDVKTTAMIAGLTLAVVFLLYKELLF
YTFDPLGAQAAGLPVNLLNFGLMILIALTVVASMKAVGVVLVLSLLIAPGATAYLLVPRFHQVMMVGALIGIVSSVSGMY
WSFYQNIPSGPAIVLVVSGFFLLALLLSPSHGVLTHPRAKGESSAFWQEIKGLFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-44 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-44 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-44 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-44 41
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_2869 YP_007086391.1 Mn2+/Zn2+ ABC transporter permease BAC0442 Protein 9e-52 44
Oscil6304_2869 YP_007086391.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 5e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_2869 YP_007086391.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 5e-45 41