Gene Information

Name : Oscil6304_2780 (Oscil6304_2780)
Accession : YP_007086307.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3439459 - 3440133 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGACTGCGAATATCCTTGTGGTTGAAGATGAAGTCAAGCTCGCTCAGTTTATCGAACTAGAACTCAAATATGAAGGCTA
TCAGGCGATTGTGGTTCGGGATGGGGTCGCTGGATTAAGAGCTATCCCCGAGTTGAGTCCGGATTTGGTCCTCCTGGATG
CCATGCTGCCAGGACTCTCGGGGTTGGAAGTCTGCCGTCGTTTGCGAACCAGTGGCAATATGGTCCCAGTAATTGTCTTG
ACGGCGCGAGATGAAGTGAGCGATCGCGCCGCAGGATTGGATGCCGGTGCCGATGATTACCTGGTGAAACCCTTTAGTTC
CGAGGACTTGATTTCCCGAGTGAAGGCCCATCTCCGAAGTCCCATCGAAGTAGACCCGGATTTGTTACCCTTTGCTGACT
TAAGTTTAAATCGACGCACCCGGGAAGTCCGCCGAGGCGATCGCACCATCGACCTGACGGCGAAAGAGTTTGATTTACTC
GAATATCTGATTTCCCATCCCCGACAAGTGGTCAAGCGCGAGCAAATTCTGGAAAATGTCTGGGGTTACGATTTTATGGG
GGATTCCAACATTATTGAGGTCTACATTCGTTACCTGCGCCTTAAGCTAGAAGCGCAGGGGGAAAAACGACTGATTCAGA
CGGTGCGTGGCGTGGGTTACGTTCTGCGCGATTAA

Protein sequence :
MTANILVVEDEVKLAQFIELELKYEGYQAIVVRDGVAGLRAIPELSPDLVLLDAMLPGLSGLEVCRRLRTSGNMVPVIVL
TARDEVSDRAAGLDAGADDYLVKPFSSEDLISRVKAHLRSPIEVDPDLLPFADLSLNRRTREVRRGDRTIDLTAKEFDLL
EYLISHPRQVVKREQILENVWGYDFMGDSNIIEVYIRYLRLKLEAQGEKRLIQTVRGVGYVLRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-28 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 3e-34 46
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-34 45
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-37 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 1e-31 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 2e-29 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 6e-35 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-30 43
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-35 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 1e-23 42
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-45 53
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 3e-36 47
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 3e-28 44
Oscil6304_2780 YP_007086307.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 3e-39 42