Gene Information

Name : Oscil6304_2381 (Oscil6304_2381)
Accession : YP_007085929.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2936258 - 2937631 bp
Length : 1374 bp
Strand : +
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGCGAAAAGAATGGGTTGCCAAACGTCAGGGCCAGAGTAATGTTACTCAAATGAACTATGCCAGACAAGGCATCATCAC
CGAAGAAATGGACTATGTAGCAAAACGGGAAAACCTCCCCGTTGAGCTGATTCGGGACGAAGTGGCACGAGGACGGATGA
TTATCCCCGCCAACATTAACCACCTCAACCTCGAACCGATGTGCATCGGCATCGCCTCCAAATGTAAAGTCAATGCCAAC
ATCGGGGCCTCTCCTAATTCCTCTGATATTAACGAAGAATTAGACAAACTCAACCTATCCGTTAAATATGGTGCCGATAC
CGTCATGGACCTGTCCACCGGCGGCGGAAACCTCGACGAAATTCGCACCGCCATTATTAATACCTCCCCGGTCCCGATCG
GCACCGTTCCCATTTATCAGGCATTAGAAAGCGTGCATGGTAACATGGAAAGTCTCACTCCCAATGATTTTCTGCACATC
ATTGAAAAACACGCCCAACAAGGTGTGGATTACATGACGATTCATGCGGGAATTTTAATCGAACATCTTCCCTTAGTCAA
AAACCGAATTACCGGAATTGTCTCCCGTGGCGGCGGAATTTTGGCCCGGTGGATGCTGCATCATCACAAACAAAATCCGC
TTTATACTCATTTCGATGACATTATCGAAATCTTCAAAAAATACGATGTTTCCTTTAGTTTAGGAGATTCCCTCCGTCCC
GGTTGTCAACATGATGCCTCAGACGAAGCGCAACTCGCTGAACTCAAAACCCTCGGACAACTCACTCGTCGCGCCTGGGA
ACATAACGTCCAGGTGATGGTAGAAGGGCCGGGTCATGTGCCAATGGACCAAATTGAATTTAACGTCAAAAAGCAGATGG
AAGAGTGTTCTGAAGCACCTTTCTATGTGCTAGGTCCTTTAGTCACGGATATTGCGCCTGGATATGACCATATTACCTCG
GCGATCGGGGCGGCAATGGCGGGATGGTACGGAACGGCGATGTTATGTTATGTCACCCCGAAAGAGCACCTGGGATTACC
CAATGCCGAAGATGTGCGAAATGGGTTAATCGCCTATAAAATCGCCGCCCATGCTGCGGATATCGCACGGCATCGCATTG
GAGCACGCGATCGCGATGACGAACTGTCTCACGCCCGGTATAACTTCGACTGGAACCGCCAGTTTGAACTCTCCCTCGAC
CCCGAACGGGCGAAAGAATACCACGACGAAACCCTCCCAGCAGACATCTACAAAACAGCAGAATTCTGCTCCATGTGCGG
ACCTAAATTCTGCCCCATGCAAACCAAAGTAGATGCCGACGCCTTAACCGAATTAGAGAAGTTCTTAGCGAAAGAACCTG
TCACTCAAGGTTAA

Protein sequence :
MRKEWVAKRQGQSNVTQMNYARQGIITEEMDYVAKRENLPVELIRDEVARGRMIIPANINHLNLEPMCIGIASKCKVNAN
IGASPNSSDINEELDKLNLSVKYGADTVMDLSTGGGNLDEIRTAIINTSPVPIGTVPIYQALESVHGNMESLTPNDFLHI
IEKHAQQGVDYMTIHAGILIEHLPLVKNRITGIVSRGGGILARWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRP
GCQHDASDEAQLAELKTLGQLTRRAWEHNVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRIGARDRDDELSHARYNFDWNRQFELSLD
PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEPVTQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-120 62
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-120 62
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 8e-117 57