Gene Information

Name : Oscil6304_1849 (Oscil6304_1849)
Accession : YP_007085442.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : helicase, type I site-specific restriction-modification system restriction subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2244215 - 2247193 bp
Length : 2979 bp
Strand : -
Note : PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family

DNA sequence :
ATGGTCAGTAAAACCAACGAAAAAGCTCTGGAAGACCTCATTGAAAACCGCTTGCTTAATGATGCGGGCTACCAGCAGGG
TAGTTCCAAAAACTTTGACCCCGAATTTGCCATTGATACCGCAAAATTTTGGCAATTCCTGGAAACAACCCAACCGGAAG
AACTTAAAAAGTTAGCCGATCGCCCCAACTGGCAACGGATGATTCTGGAACGAATCGATCGCCAAATCAAGAAAAACGGG
ATTGTGTCGGTACTTAAAAAAGGGGTGGCGATCGATGATGCGGAACTGACCCTATACTATAGCCATCCCTATAACGACCT
CAACCCCGAGATCGCCGCTAACTTTGAACAGAACATCTTTTCTATTAGCCGCCAAGTCCACTTTTCCGCCACAGACAACG
CCCCATCCATCGATTTGGTCATTTTCCTCAATGGCTTGGCGATCGCAACCCTGGAACTTAAAAATCCTTGGACAAACCAA
ACCGTCTACCACGCTAAAAAACAATACTGCGATCGCAATCCCAAAGAACCCCTCTTTAACTTTGGTCGGTGTTTAGTCCA
CTTTGCCGCCGATACGGATGAAATTTGGATGACCACCAAACTCACCGGAAAAAACACCTATTTCCTACCCTTCAATCAAG
GAAATAATCACGGCAAAGGCAACCCCACCAACCCCAACGGACACAAAACTAGCTATCTCTGGGAAGATGTTTTAAGCCGT
ACCAGCCTCGCCCATATTCTGGAACATTTCGTTTTACTCGAAGGCAAACCCAAAGACCCTCTCCCAGATAAAACCCTGAT
TTTCCCCCGTTATCACCAAAGGGATGTCGTCAACCAACTCCTCACCGATGCTAAAACGAACGGTCCCGGTCAAACCTATT
TAATCCAACATTCTGCCGGTTCTGGGAAATCAAACTCAATCACCTGGCTGGCATTTCAACTGATTCAACTTTACCAAACC
CACCAAAGTGAGCCCTTATTTAACTCCGTAATTGTTGTCACCGATCGCCGCAACCTTGACAAACAACTCCGGGACAATAT
TAAAGACTTTTCCCAAGTCAAAAATATTATTGCCCATGCCAACCGTTCCGAAGACTTGAAAAATGCCCTGGAATCGGGCA
AAAAAATCATTATCAGTACCATCCAAAAATTTAGATTCATTGTGGATGGCATCGAAGGGTTAGGCGATCGCCGCTTTGCG
GTTATCATCGATGAAGCCCACAGCAGCCAGAGTGGAAGTTCAGCGGACTCCCTGAATACAACCCTCAATCAAAATGAGGA
CGAAGCAGAACCGGAAGACAACCAAGACAAAATCCTCAAGGTCATGCAGGGGCGTAAACTCAGCAAAAACGCCTCCTATT
TTGCCTTTACCGCCACCCCGAAAAACACCACCCTCGAAAAATTTGGGCAACGTCAAAACGATGGCAGTTTCACACCCCAT
CATCTCTACTCCATGAAACAGGCGATCGAGGAAGGCTTTATCCTCGATGTCCTCGCCAACTATACCACCTATAAAAGCTA
CTACGAAATCCAAAAATCCATCGAAGATAATCCCCAATTCGACACCGCCCAAGCCCAAAAGAAACTCAAAGCCTACGTCG
AAAGCAATCCCAAAACCATCGCCACCAAAGCCGAAATCATGGTGAATCACTTCCTAGAACAAGTGGTTAGCCCCAAAAAA
CTCAAAGGGCAAGCCAAGGGGATGGTGGTTACCCGCAATATTAAAACGGCGATTCGGTACTATTCGGAAATCCAAAAACT
GCTCAAGGCTAAAAATGCAGACTTTCGGGCGATCGTTGCTTTCTCCGGAAAAAAGAAAGTAGACGGCATTGAACACACTG
AAGAATCCCTCAACGGCTTTCCCAGTCAGAAGATTGAAGAGAAGTTTCAAAGCAATGATTATCGCCTGTTAGTGGTCGCC
AATAAGTACCTAACCGGCTTCGATGAACCCCTACTTCACACCATGTATGTGGATAAAAAATTACAGGGAGTCCTCGCTGT
GCAAGCCCTTTCTCGCCTCAATCGCTGTAACAACAAACTGGGCAAAAACGATACGTTTATCCTCGATTTCGCCAACAGCC
CCAGCGACATTAAAGCCGCCTTCGATCCGTTCTACACCGCCACCGAACTCAGCGAAGCCACCGATGTCAATGTTCTCCAT
GACTTGAAAGAGAGCCTAGACGGATTAGGCGTCTATGAAATCCACGAAATCAACGAATTTAATCAACTGTTTTTTGACGG
CGTAGAAGCGGATCAACTTAGCCCAATTATCGATACCGCAGCGGAACGCTTTAACCAGGAACTGGAACTAAGCGAAGAGG
ACAAAATCGATTTTAAAATTAAAGCCAAACAATTTGTCAAAGTTTATGCTCAACTCGCCTGTTTAATCCCCTTTCATAAC
CTCGCTTGGGAAAAACTGCATTGGTTCCTAAAATTTCTCATTCCCAAACTGATTGTCAAAAATCCCCAACAGGAGCAACT
CGATGAACTGCTCAATAGCGTGGATCTCAGTACCTACGGCATTGAACGAGTGACCCTGAATGCAGCGATCGCCTTGGAGG
AATCTAGCAGTGAGATTAAACCCCAGAATCCCAACCCCCGGGGTTACCATGAAGCGGAAAAAGAATATGACCCCCTAGAC
GAAATCATTGCCCTGTTTAATCAAACTCACTTTGCTCAATGGGACGCCACCCCGGAAGAACAAAAAATTAAACTGATTAA
CCTTGCTCGTAATGTCGCCCAAAATACGGATTATCAAACCCAGGTGGTGAACAATCCGGACCCGCAGAATAGCAGAATGG
CGATCGGTAAACTCATCAAACAAGCGGTCAATCATGAGCGCCGCAAAGAACTAACCTTGTACAAAAATTACTCCCAAGAC
CCAGATTTTGAACGGGCTCTTGAAAACAGTATTATTCGCATTCTGGAAACCGCCCTCAACAATCCAGAATTTGATTTGTT
CTCAGAAGAAGCCATCTAA

Protein sequence :
MVSKTNEKALEDLIENRLLNDAGYQQGSSKNFDPEFAIDTAKFWQFLETTQPEELKKLADRPNWQRMILERIDRQIKKNG
IVSVLKKGVAIDDAELTLYYSHPYNDLNPEIAANFEQNIFSISRQVHFSATDNAPSIDLVIFLNGLAIATLELKNPWTNQ
TVYHAKKQYCDRNPKEPLFNFGRCLVHFAADTDEIWMTTKLTGKNTYFLPFNQGNNHGKGNPTNPNGHKTSYLWEDVLSR
TSLAHILEHFVLLEGKPKDPLPDKTLIFPRYHQRDVVNQLLTDAKTNGPGQTYLIQHSAGSGKSNSITWLAFQLIQLYQT
HQSEPLFNSVIVVTDRRNLDKQLRDNIKDFSQVKNIIAHANRSEDLKNALESGKKIIISTIQKFRFIVDGIEGLGDRRFA
VIIDEAHSSQSGSSADSLNTTLNQNEDEAEPEDNQDKILKVMQGRKLSKNASYFAFTATPKNTTLEKFGQRQNDGSFTPH
HLYSMKQAIEEGFILDVLANYTTYKSYYEIQKSIEDNPQFDTAQAQKKLKAYVESNPKTIATKAEIMVNHFLEQVVSPKK
LKGQAKGMVVTRNIKTAIRYYSEIQKLLKAKNADFRAIVAFSGKKKVDGIEHTEESLNGFPSQKIEEKFQSNDYRLLVVA
NKYLTGFDEPLLHTMYVDKKLQGVLAVQALSRLNRCNNKLGKNDTFILDFANSPSDIKAAFDPFYTATELSEATDVNVLH
DLKESLDGLGVYEIHEINEFNQLFFDGVEADQLSPIIDTAAERFNQELELSEEDKIDFKIKAKQFVKVYAQLACLIPFHN
LAWEKLHWFLKFLIPKLIVKNPQQEQLDELLNSVDLSTYGIERVTLNAAIALEESSSEIKPQNPNPRGYHEAEKEYDPLD
EIIALFNQTHFAQWDATPEEQKIKLINLARNVAQNTDYQTQVVNNPDPQNSRMAIGKLIKQAVNHERRKELTLYKNYSQD
PDFERALENSIIRILETALNNPEFDLFSEEAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 57
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 57
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_1849 YP_007085442.1 helicase, type I site-specific restriction-modification system restriction subunit VFG1098 Protein 0.0 57