Gene Information

Name : Oscil6304_1796 (Oscil6304_1796)
Accession : YP_007085394.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2189803 - 2190555 bp
Length : 753 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGTTTTCTGTGGAAGCAACCAAAACCCTTCCTAGGGCAGAATTCAGCAAAAATCATCGGATCTTAGTCGTAGAAGATGA
AGACCTAATTCGGGAAATGCTGGTTTTAGCCTTAGAGGAGGAAGGTTACGAAGTCAGCATTGCCGCAGATGGGCAAAGCG
CCCTCAACAGTTTGTATCGCTCCGAACCTGTCTCAACGGATTTTCCCTTTGACTTAATTGTGTTAGATATCATGCTGCCC
CAAGTCAACGGGCTGGATTTATGTCGCCTCCTCCGTCAACAAGGGAACCCCGTGCCGATTTTGATTTTGAGTGCCAAAGG
CAGCGAAACAGACCGGGTATTAGGGTTAGAAGTAGGGGCGGATGACTACTTGACCAAACCCTTTAGCATGAGGGAGTTTA
TTGCGCGATGTCGAGCTTTATTCCGTCGTCAACGCCTGAATGGGTTAATGGATCCGCAAATCTTGCGATTTGGAGAGATT
ACCTTATATCCTCAGGAATGTCGCGTAATGGTCTCCACTGAAGAGGTTAATTTATCTCCAAAAGAATTTCGTCTGATTGA
GCTATTTATGAGCTATCCCCGTCGAGTATGGTCCCGGGATCAGTTGCTCGATCGCGTCTGGGGACCCGATTTTGTCGGAG
ATAGCAAAACCGTTGACGTTCATATCCGATGGTTGCGAGAAAAATTAGAGCGGGATCCATCCCAACCCGAGTACATCATT
ACGGTTCGGGGATTTGGCTATCGGTTAGGCTAA

Protein sequence :
MFSVEATKTLPRAEFSKNHRILVVEDEDLIREMLVLALEEEGYEVSIAADGQSALNSLYRSEPVSTDFPFDLIVLDIMLP
QVNGLDLCRLLRQQGNPVPILILSAKGSETDRVLGLEVGADDYLTKPFSMREFIARCRALFRRQRLNGLMDPQILRFGEI
TLYPQECRVMVSTEEVNLSPKEFRLIELFMSYPRRVWSRDQLLDRVWGPDFVGDSKTVDVHIRWLREKLERDPSQPEYII
TVRGFGYRLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-36 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-42 45
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-46 44
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-44 44
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 6e-41 43
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 7e-36 42
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 3e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 3e-36 43
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 4e-36 43
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 3e-40 42
Oscil6304_1796 YP_007085394.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 5e-29 41