Gene Information

Name : Oscil6304_1506 (Oscil6304_1506)
Accession : YP_007085131.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1861684 - 1864152 bp
Length : 2469 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCTATTAAAGTGATTATGCTGGCCCAGGAGGAAGCACGCCGCCTGGGACATAACTT
TGTAGGTACCGAACAGATCCTCCTGGGTCTGATTGGAGAAGGTACTGGAGTTGCAGCAAAAGTGCTCAAGTCAATGGGGG
TTAATCTCAAAGATGCCCGCATTGAGGTCGAAAAAATTATTGGCCGGGGTTCGGGCTTTGTGGCGGTGGAAATTCCGTTC
ACGCCTAGAGCCAAGCGAGTTCTGGAGCTTTCTCTAGAAGAAGCGCGACAACTCGGTCACAACTACATCGGCACCGAACA
CCTCCTACTGGGATTGATTCGGGAAGGCGAAGGCGTGGCGGCTAGAGTTTTGGAAAACCTCGGGGTTGACCTCTCGAAAG
TCCGCACGCAAGTGATTAGGATGCTTGGAGAAACCGCCGAGGTGACCTCTGGGGCCAGCAATGCGCGCACCAAGACTCCC
ACCCTGGATGAGTTTGGGGCTAACCTGACTCAAATGGCTGCCGAAGGCAAGCTGGATCCGGTGGTGGGGCGTCAGAAAGA
AATTGAACGGGTGATCCAGATTCTGGGTCGTCGGACTAAGAATAACCCGGTGCTAATTGGGGAACCGGGGGTGGGTAAAA
CGGCGATCGCCGAAGGATTGGCGCAACGGATTGCCAACAATGACGTGCCCGATATCCTCGAAGATAAGCGGGTTGTCACC
TTAGATATTGGGTTACTGGTTGCCGGAACCAAATATCGGGGTGAATTTGAAGAACGGCTTAAGAAAATTATGGATGAAAT
CCGCTCGGCGCGGAACGTCATCCTGGTGATTGATGAAGTGCATACCCTGATTGGGGCGGGTGCAGCCGAAGGGGCGATCG
ATGCGGCAAACATCCTCAAACCGGCTTTAGCCCGGGGTGAATTGCAATGTATCGGGGCGACCACCTTAGATGAGTATCGC
AAACATATCGAGCGGGATGCGGCCTTAGAACGCCGATTCCAGCCGGTGATGGTGGGCGAACCCACGGTGGATGAAACCAT
TGAGATTCTGTTTGGTTTGCGCGATCGCTACGAGCAACACCACAAACTGAAAATCTCCGATGAAGCCCTGGATGCGGCAG
CCAAACTGTCCGATCGCTATATCAGCGATCGCTTCCTACCGGATAAGGCGATCGACCTTGTGGATGAAGCCGGTTCTCGC
GTGCGGTTGATTAACTCTCAACTGCCTCCCGCCGCCAAAGAACTGGATAAAGAACTGCGGCAAGTGCTCAAAGACAAGGA
CGATGCCGTGCGTTCTCAGGACTTTGACCGCGCTGGAGAACTGCGCGATCGCGAAATGGAGATCAAAGCCGAAATCCGCT
CGATCGCCAGTAACAAAAAAACTGGCGTCAGTGACAGCGAACTTTCTCCCGTCGTCACGGAAGAAGACATCGCCCAAATC
GTCGCCAGTTGGACCGGCGTTCCGGTGAACAAACTCACCGAATCCGAATCCGAGAAACTGATGCACATGGAAGACACCCT
GCATCAGCGTCTCATCGGTCAAGAAGAAGCCGTCAAAGCCGTCTCCCGCGCCATTCGTCGTGCTCGCGTCGGCCTGAAAA
ACCCCAACCGCCCGATCGCCAGCTTTATCTTCTCCGGTCCTACCGGCGTCGGTAAAACCGAACTGACCAAAGCCCTAGCG
TCCTACTTCTTCGGGTCAGAAGAAGCCATGATTCGCTTGGATATGTCCGAGTACATGGAACGCCACACGGTGTCCAAACT
CATCGGGTCACCTCCGGGTTATGTCGGGTATAACGAAGGCGGACAACTGACCGAAGCCGTTCGTCGTCGTCCCTACACCG
TGGTTCTTTTCGATGAAATCGAAAAAGCTCACCCCGACGTCTTCAATATGCTCCTGCAAATCCTAGAAGACGGACGCCTC
ACCGATGCCAAAGGTCGCACGGTAGACTTCAAAAATACCTTGCTGATCATGACCTCGAATATTGGGTCTAAGGTCATTGA
AAAAGGTGGCGGTGGACTCGGATTTGAATTTGAGCAGAACCAAGCCGATGCTCAGTACAACCGCATTCGCAGCTTGGTCA
ACGAAGAACTCAAAAACTACTTCCGTCCGGAATTCCTCAACCGTCTGGATGAGATTATCGTCTTCCGTCAGTTGGTCAAG
GACGAAGTGAAGTTAATCTCGGAAATCATGCTGAAAGAAGTCTTCAGCCGCTTAACTGAGAAAGGAATTACTTTAGAAGT
CACCGATCGCTTTAAAGAACGGTTGATTGAAGAAGGCTATAACCCGGCTTATGGTGCGCGTCCTTTACGCCGTGCCATTA
TGCGTCTGTTAGAAGACGTTTTAGCCGAGGAAATTCTTTCCGGTCGGGTGAAAGAAGGCGAGACAGCGCTTGTAGACATC
GGGGAAGAAGGTCAAGTGATCGTCCGACCCGGTGAACAACGGGAACTCCTGCCCCAATCTGCGGAATAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVTSGASNARTKTP
TLDEFGANLTQMAAEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRSARNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPTVDETIEILFGLRDRYEQHHKLKISDEALDAAAKLSDRYISDRFLPDKAIDLVDEAGSR
VRLINSQLPPAAKELDKELRQVLKDKDDAVRSQDFDRAGELRDREMEIKAEIRSIASNKKTGVSDSELSPVVTEEDIAQI
VASWTGVPVNKLTESESEKLMHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALA
SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL
TDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEQNQADAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLVK
DEVKLISEIMLKEVFSRLTEKGITLEVTDRFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVKEGETALVDI
GEEGQVIVRPGEQRELLPQSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_1506 YP_007085131.1 chaperone ATPase VFG0079 Protein 0.0 60
Oscil6304_1506 YP_007085131.1 chaperone ATPase VFG0080 Protein 2e-154 54