|
Name : Oscil6304_1316 (Oscil6304_1316) Accession : YP_007084949.1 Strain : Oscillatoria acuminata PCC 6304 Genome accession: NC_019693 Putative virulence/resistance : Virulence Product : chaperone ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 1608889 - 1611375 bp Length : 2487 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTTTGAGTATTTCACAGAAAAGTCCATAAAAGCAATTATGCTGGCGCAGCAGGAAGCTCGCCGCCTCGGTCATAACTT TGTTGGGACCGAGCAATTACTCTTAGGATTAATTGCCGAAGGAACAGGCATTGCCGCGCAGGTCCTCAAATCTGAAGGCG TCACCCTGAATAAAGCTCGGGTAGAAGTCGAAAAAATCATCGGCAGAGGCAGCGGTTTCGTCCCGGTGGAAATCCCCTTC ACCCCTCGCGGTAAAAGCATTTTAGAAATGTCCCTGCGCGAAGCCAGCCAATTGGGACAACAATACATCGCTACAGAACA CCTTCTGCTTGCCTTAACCCAAAGCCGAGAAGGGGTTGCCTTTAAAATTTTAGAAAACCTCGGCGTCAGCCTGGAACGAG TCCGTGCAGAAGTGATTAAACGAGTCGGGGAAAATCCTGCACCCGCCGGTGCCGTCTTTGGTGGGGAACGGGGTCGGGGT CCTGGGTCCCAAAAAGCTCTGCAACTCAGCGAATTTGGGGTCAACCTGACGGAAAAAGCCCTAGAAGGGAATCTGGATCC CGTGGTGGGACGGAAAAAAGAAATTGAGCGGATTATCCAAATTTTGGGACGACGCACCAAAAATAATCCCGTTTTAGTTG GGGAACCCGGGGTGGGTAAAACTGCGCTGGCGGAAGGATTGGCGCAACGCATCGCCAACCAAGACGTTCCCGAAACCTTG AAAGATAAACAAGTGTTTACCCTGGATATGGGGTCAATTCTGGCGGGGACGCGCTTCCGGGGCGATTTTGAGGAACGCAT CAAAATGATTATGGAGGAAGTGCGTCAAGCCAAGAATATCATCCTGGTGATTGATGAAATCCATACCCTTGTCGGTGCTG GTTCCGTGGAAGGTGGGATGGATGCGGCGAATCTGCTCAAACCGGCATTGGCGCGGGGAGAGTTCCAGTGTATTGGTGCG ACAACGTTAGATGAGTATCGCAAGCATATCGAACGGGATGCGGCGTTAGAACGGCGCTTCCAACCTGTCACCATTGGCGA ACCGACAATCCAAGAAACGATTGAGATTTTGCAGGGTGTCCGAGTGCGCTATGAAGAACATCACAAATTGACCATTTCTG ATGAAGCGCTGGTTGCTGCTGCGGAATTATCGGAACGGTATATTACCGATCGCTTTTTACCGGATAAGGCGATCGACTTA ATTGATGAAGCGGGTTCCCGAGTGCGCCTGCGGAATGGCAAAATGCCATCGGCATTGCGACAAATGAAAAAACAACTCAC GGAAGTGACGGCAGAGAAAGAAGCGGCAGTCCGTACTCAAGATTTTGAGAAAGCCTCCAAATTGCGCGATCGCGAATTAA CCCTAGAAGAAGAACTGGATCAACGCATCAAAAACGAGCACGCGGAAGTCCAAAATACCAAAAACCTCGTCGTCACCGGG GAAGATATCGCCCAAATCGTCGCATTCTGGACCAGTGTTCCGGTGAGCAAACTCACCGAATCTGAGTCTGAGAAACTGAT GTTGATGGAAGAAACCTTGCATCAACGGTTAATCGGTCAAGAAGAAGCAGTTAAAGCGGTTTCTCGTGCCATTCGTCGTG CGCGGGTTGGCTTAAAAAATCCCAACCGTCCGATCGCCAGCTTTATCTTTTCCGGTCCTACCGGCGTGGGTAAAACCGAA CTCACCAAAGCCTTAGCTGCCTACTTCTTCGGGTCAGAAGAAGCCATGATTCGCCTAGATATGTCTGAATACATGGAACG TCATACCGTCTCCAAACTGATTGGTTCTCCTCCGGGATTCGTCGGATATGACGAAGGGGGACAACTCACGGAAGCAGTGC GCCGTCGTCCCTATACGGTGATTCTTTTCGACGAAATCGAGAAGGCACACCCGGATGTGTTTAATATGTTGCTGCAAGTC CTGGAAGATGGACGGCTGACCGATGCCAAAGGTCGGGTGGTAGACTTCAAGAATACCATGCTGATTATGACCTCAAATAT CGGGTCTCGCGTAATTGAAAAAGGTGGCGGTGGATTAGGATTTGAGTTTGCCGACAACCGCGCCGAAGCTCACTATGACC GAATTCGCAGCTTAGTGAATGAAGAACTGAAGAATTACTTCCGTCCGGAGTTTCTCAACCGTTTGGATGAGATTATTGTC TTCCATCAGTTAACCAAGGATGAAGTCACAGAAATTGCTGAAATTCTGTTGCGTGACTTGTTAAAACGCCTGGTTGAGAA ACAGATGACCCTGGAAATAAGCGATCGCTTCAAAGAGCGGTTGGTAGAAGAAGGGTATAATCCCAGCTACGGTGCAAGAC CGTTACGCCGCGCCATTATGCGCCTGTTGGAAGACCATTTAGCCGAAGCGATGTTATCCGGAAAGCTAAATGAAGGAGAT TCGGCACGGATCGACCTCGACGAAGCAGGGGAAGTGGTGGTACAGCGTGTGGAAGGGCGATCGTTAGTTTCGCCTAGCAC TCGGTAA Protein sequence : MFEYFTEKSIKAIMLAQQEARRLGHNFVGTEQLLLGLIAEGTGIAAQVLKSEGVTLNKARVEVEKIIGRGSGFVPVEIPF TPRGKSILEMSLREASQLGQQYIATEHLLLALTQSREGVAFKILENLGVSLERVRAEVIKRVGENPAPAGAVFGGERGRG PGSQKALQLSEFGVNLTEKALEGNLDPVVGRKKEIERIIQILGRRTKNNPVLVGEPGVGKTALAEGLAQRIANQDVPETL KDKQVFTLDMGSILAGTRFRGDFEERIKMIMEEVRQAKNIILVIDEIHTLVGAGSVEGGMDAANLLKPALARGEFQCIGA TTLDEYRKHIERDAALERRFQPVTIGEPTIQETIEILQGVRVRYEEHHKLTISDEALVAAAELSERYITDRFLPDKAIDL IDEAGSRVRLRNGKMPSALRQMKKQLTEVTAEKEAAVRTQDFEKASKLRDRELTLEEELDQRIKNEHAEVQNTKNLVVTG EDIAQIVAFWTSVPVSKLTESESEKLMLMEETLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTE LTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQV LEDGRLTDAKGRVVDFKNTMLIMTSNIGSRVIEKGGGGLGFEFADNRAEAHYDRIRSLVNEELKNYFRPEFLNRLDEIIV FHQLTKDEVTEIAEILLRDLLKRLVEKQMTLEISDRFKERLVEEGYNPSYGARPLRRAIMRLLEDHLAEAMLSGKLNEGD SARIDLDEAGEVVVQRVEGRSLVSPSTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Oscil6304_1316 | YP_007084949.1 | chaperone ATPase | VFG0079 | Protein | 0.0 | 55 |
| Oscil6304_1316 | YP_007084949.1 | chaperone ATPase | VFG0080 | Protein | 1e-153 | 53 |
